Transcript Information: S_Transcript_144930.p1


Annotated TAIR IDAT5G54130.2
Annotated Gene NameCalcium-binding endonuclease/exonuclease/phosphatase family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21962900-21965279 | Forward length=436
E-Value3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.657403026488
Replicate 214.529154098851
Replicate 319.005014622735
Condition 2: 8 Hour
Replicate 149.282456891423
Replicate 246.107834391632
Replicate 338.862429474936
Condition 3: 24 Hour
Replicate 19.5904366544072
Replicate 26.4951167322459
Replicate 34.613788610692


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144930.p1 GENE.S_Transcript_144930~~S_Transcript_144930.p1 ORF type:5prime_partial len:164 (-),score=13.73 S_Transcript_144930:552-1043(-)
CTCGAACAAACAACCGCGGTGATGCGTGATGCAGGTCTATTAACAGCAGTGCATCAAAGTCAGTTCCGAGTGTTAAATTACAAGGAGTTGTTGTTCAATGACATTGCTGATCGTGTAGCGCAGATTTTGCATGTTGAGCTAGTTTGTAATAACATTTTCCAGAGCAATTCCAGCAGCAAAGGCAAGGAGGTTTTAATTGTAAATACTCATTTGATATTTCCACATGATGCTAGGTACTGTTTCCTCCGGTTAAAGCAGGTGTACAATATTTTGCAATATACTAAGTCATACATCCACAAGCATACACTCCCCCTGCCGGTCTTCCTCTGTGGGGATTGGAATGGAAGTAAGAAGGGACATGTCTATAAGTTTTTGTGTTCACAAGGCTTTTTCTCGTCCTATGACATAGCACGCCATGAGAAAGATGAAACCGAAGATGCACAAAAGGTGGCAGCTACTTCTTTATTGATTTTTGACTTTCTTATAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144930.p1 GENE.S_Transcript_144930~~S_Transcript_144930.p1 ORF type:5prime_partial len:164 (-),score=13.73 S_Transcript_144930:552-1043(-)
LEQTTAVMRDAGLLTAVHQSQFRVLNYKELLFNDIADRVAQILHVELVCNNIFQSNSSSKGKEVLIVNTHLIFPHDARYCFLRLKQVYNILQYTKSYIHKHTLPLPVFLCGDWNGSKKGHVYKFLCSQGFFSSYDIARHEKDETEDAQKVAATSLLIFDFLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST