Transcript Information: S_Transcript_145028.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46043254732146
Replicate 20.91610198854733
Replicate 30.51052556632804
Condition 2: 8 Hour
Replicate 11.1068541687093
Replicate 21.7030473012941
Replicate 31.3645092757514
Condition 3: 24 Hour
Replicate 10.491320908958
Replicate 20.66658269342198
Replicate 31.0036453656015


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145028.p1 GENE.S_Transcript_145028~~S_Transcript_145028.p1 ORF type:complete len:578 (+),score=69.25,RVT_1|PF00078.23|9.4e-27,zf-RVT|PF13966.2|1e-11 S_Transcript_145028:65-1735(+)
ATGGAATGGGATTTTATTAGAAACATGCTCTTCTCCTTCAATTTTGACTCCCACTCTATTAGGCTTATCATGGAATGTATCACCACAATTAACACCTCAGTCCTGATCAATGGGGGGATCACTGAAACTTTTCAACCGTCTAGGGCCCTTAGACAAGGAGATCCCCTCTCTCCCTACATCTTCTTCCTGTGCATGGAGTTCCTCTCCAAGCTTATTCATAATGCTTGCGAGGATAAATCTTGGACCTCCTTCTCCTTTTCTCAGTCAGGTCTTGTGATCTCCCATTTATTGTTTGCTGACGATGTTATCCTCTTTGGGGAAGCAAACCTCAATACCCTGGAAGCAATGGAATCAACCCTGAACCTGTTTTGTCAAGATTCTGGGCAGAAAATCAATGCTAACAAGAGCAATCTCTTCTTCTCACCAAATACTTCCCCGGACATTATCCAAGCTTTTGAGGATACCCTAGGGACAAAATCAACCTTGGACCTAGGCACTTACCTTGGCCTTCCCCTTACAACCAAGAGACCTACCAAAAACCAACTGAGGGGGATTGTGAATAAGGTTAGAGATAGGCTTGCCTCTTGGAAGGCTAACTTCATTACCAGAGCTGGGAGGGTCTGTCTTATCAATGCCACCCTAAATGCGATCCCTACCTACTACATGCACTCTATTACTTTCCCTAAATGTATGTCTAATGAGTTAAAAAGGATTGTGAATAACTTTCTTTGGGGGGACTCTTTAGATAAGAGGAAACTCCATTTAGTTGGGTGGGAAGACATCACCAGACCTAAGGACCAAGGGGGGTTGGGAATTAGGGATCTTGTCCATCTTAATAAAGCTTTTATGGTCAAGTTAGGGTGGAAAACCTTCCTTCATGAGGATAACTTTGCTACCTTGGTACTTAAGGATAAGTACATCCATAACAGGCCTCACTCTATTGCTTTTAGGGCTGGCTCCCATGTCTGGCAGGACATAGGCAAAGGTTGGGACTTCCTTCAGGCCCATACCATTTGGTCAATAGGTCAAGGGGATAAGGTTCTTTTCAGGCTTGATAACTGGCTCCCTTGTGGGAAGCTTAGGAACCTTATTGAGGAGCCTTTAACCTTCCAGGACTCCTTACTCCGGGTGAAGGACAGCCTTACCAACAATGCTTGGGATCTTAGGGGGCTATCCTTTGAGTTACCTGAGGACATTCTTCAATGGATCCAGCTCACCCCTATACCCAACTCCTCCTCTCCAGATATTCTTTCTACTTCTCTCCTTAAGGATAGGAAATTCGATCTTGCTTCAACCTATGTTGGTCTCAAAGCATCCACTACTAGTGAGAAGCTCCTTACTTCCAAATGGATTTGGAAGAGCCTTACACTCCCAAAAATCCAATTCCTTCTCTGGCTTAGCGTTTTGGATAGACTACCTCACAAAGCTACTCTGGCCCGTAGAGGGATCATCCCTTCGGAAACTTGCCATGCTTATCCTGCGAGAGAGGATACACTCCAAGTGCTTAGGGATTGTCATGTTGCTAGGAGCGTTTGGGATAAGTTCACCACCCCACCTGATTTTTTCAACCTTGACCTTCTCCAGTGGCTCAAACAAAATACCACAAATAAATCACTCACTCATCATACCCCCTGGGGCACTCTCTTTACCTTTATTGCATGGGGTATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145028.p1 GENE.S_Transcript_145028~~S_Transcript_145028.p1 ORF type:complete len:578 (+),score=69.25,RVT_1|PF00078.23|9.4e-27,zf-RVT|PF13966.2|1e-11 S_Transcript_145028:65-1735(+)
MEWDFIRNMLFSFNFDSHSIRLIMECITTINTSVLINGGITETFQPSRALRQGDPLSPYIFFLCMEFLSKLIHNACEDKSWTSFSFSQSGLVISHLLFADDVILFGEANLNTLEAMESTLNLFCQDSGQKINANKSNLFFSPNTSPDIIQAFEDTLGTKSTLDLGTYLGLPLTTKRPTKNQLRGIVNKVRDRLASWKANFITRAGRVCLINATLNAIPTYYMHSITFPKCMSNELKRIVNNFLWGDSLDKRKLHLVGWEDITRPKDQGGLGIRDLVHLNKAFMVKLGWKTFLHEDNFATLVLKDKYIHNRPHSIAFRAGSHVWQDIGKGWDFLQAHTIWSIGQGDKVLFRLDNWLPCGKLRNLIEEPLTFQDSLLRVKDSLTNNAWDLRGLSFELPEDILQWIQLTPIPNSSSPDILSTSLLKDRKFDLASTYVGLKASTTSEKLLTSKWIWKSLTLPKIQFLLWLSVLDRLPHKATLARRGIIPSETCHAYPAREDTLQVLRDCHVARSVWDKFTTPPDFFNLDLLQWLKQNTTNKSLTHHTPWGTLFTFIAWGI*

Click here to download the sequence:
Link to NCBI Protein BLAST