Transcript Information: S_Transcript_145451.p1


Annotated TAIR IDAT1G69530.3
Annotated Gene Nameexpansin A1
Annotated Gene Symbol(s)ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2,
Annotation TypeOrtholog
Chromosome Positionchr1:26142034-26143200 | Forward length=275
E-Value7E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8403571402665
Replicate 23.8819338588539
Replicate 33.4317496256826
Condition 2: 8 Hour
Replicate 16.6945529096823
Replicate 25.0407456428751
Replicate 36.9883601641648
Condition 3: 24 Hour
Replicate 10.8295525376175
Replicate 23.2417857064902
Replicate 33.9908298109361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145451.p1 GENE.S_Transcript_145451~~S_Transcript_145451.p1 ORF type:5prime_partial len:790 (+),score=70.46,DPBB_1|PF03330.14|1.5e-23,RVT_3|PF13456.2|7.7e-16,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|1.8e-15 S_Transcript_145451:2-2371(+)
GGCACTATGGGAGGAGCTTGTGGGTACGGAAACTTATACAGCCAAGGGTACGGAACAAGCACAGCAGCACTAAGCACAGCCCTATTCAACAACGGGTTGGCATGCGGGTCATGCTACGAAATCCGGTGTGCCCATGACCCGAAATGGTGTTTACCGGGTTCAATAGTAGTGACAGCCACCAATTTCTGTCCACCAAACAACGCCTTACCAAACAATGCAGGTGGCTGGTGTAACCCTCCTATGCAACACTTTGATCTCTCTGAGCCTGTTTTCCAACACATTGCTCAGTACCATGCTGGCATTGTACCTGTTGTTTACAGGAGAAGAGTACTTTTCCCTGAAGCAAGTGAAGAGCAGTTTCATGTAATCGACTACTGTCTCCAAAAATTTTGTGGGGCATCAGGGGAGCAAGTGAATTATGCCAAGTCAACCATATGCTTCTCCAAAGGCGTCAGTGATGCTGTTATCGATTCTATTGCTCAAGCAAGTGGTATGGAAATAACCCAAGACCTTGGCAAATACTTGGGGATGCCTACTGACAGACACATGTCTCGTGCTTCATTTCAACACCTGCTTGACAGGGTGAATGCAAGACTTGAGGGATGGCAAACAAAGTATCTCTCCATGGCAGGGCGCGTAACTTTGGCGAAGTCGACTCTATCAAGCATCCCTTATTATTCAATGCAAACTGCCCTGCTCCCAAGGGCGGTTTGTGATGAGATTGACAAAAAAACACGAAGGTTCATTTGGGGCAGCAAAGAAGGAGAAAAGAAAATTCACCTGGCAAACTGGTCCCTGGTCACACAACCAAAGGAAAGAGGGGGCCTGGGTATACGGTCTATGCGGCAGGCCAACACGGCTTTTCTTGCAAAGCTTGGTTGGAGAACGTTAACCGAACCTGGGAGTCTCTGGTCCCGTGTTTTAAGGAGCAAGTACTGTGCTGGGAGATGCGACATCGACATGTTCGCGGAGCATCGAAGTATGTCTAACACTTGGAAAGGTATCACGCATGCAGCATCCACTATTCGCAAAGGTGTTCGAGCTATAATTGGTAATGGGCAACGAACTTTCTTCTGGCTCCACCATTGGGTCGTAGACCACCCACTCGAACATGATGCATCCCAGACCCTCAACGAGGATGAGCTAGGCAAAACAGTCGCGGATTATTGGGATGGGGAACAGTGGATGTGGGATCAGTTCTCTCACCTCCTCCCTCCCAATATCCTTCAAAAAATAGCTTCACTACATGTGATTAACAAGTCAGGAGCTCAAGACAGCCTCTCTTGGGGGGGCACTAGTAATGGCGAGTGCACGATTACGTCAGCATTGGAAATTATTAGGATGGATGATGATGGGTCATATAATCCCTTATGGAAGAAGTTGTGGGCTGTTTCTGCATCACAGAGAATACGCAACTTCCTATGGCTTTGTATGCATGATAGCATCCTATCCAATGCTAACCGTGCACGAAGAAATTTAACTACTGATGCCTCGTGTCGAGAATGTAACCATCACGAAGAATCAACCCTTCATATTCTTCGTGATTGCCCTCATGCCAAGAATATCTGGGCGCAACTAATCCCACACCAGGAATTGGAGCGTTTCATGAGGGCTCCCCTACCAGAATGGATAGCTGCTAATATAACCCCAACGGATGACTGGGCGACACTCTTTGCCTATGCTATTTGGTGGTTGTGGCGATGGAGAAATTGTAGAACTATGGGTGATGCAAATGATATCCCTGATAGGGGTGCCGAGTTCATCCAAGCCAAGGCGACAGAGTATTTGGAAGCGAACTCGAAGCGGGTCGCGAAACTGCAAGGTATAAAGCGGCCTCGGGCTGAAGCGTTCATCTCATGGCAAGCTCCTCCAATGGGATGGACTAAACTCAATACCGACGGCGCGGCAAAGGGTAATCCTGGAGCTGCGGGAGGGGGAGGCATTTTTCGTGCCTCTAATGGTGCCTTCATGAAGGCTTATACTGTCAAGCTAGGCACTTGTACAGCTTTCGAGGCGGAATTGCAAGCCATATTCCATGGCCTGAAGTTCTCCCAACAGATGGGCATTACTCAACTAGTTCTTGAAACTGACTCCGAGTTGGCCCACGATATGCTCATCCATACAACACCACCACACAGCCCGTATTACTTTCTGCTGGAATGCTGCAAGGAACTCATTAATGGCCCTGGAATCAAAGTGCAAATTCACCACGTCTACCGAGAGGCAAATGCAGCGGCTGATTGGCTAGCTAACTTGAGTTTTACTTTACTAGACTTCATTTGTGTTTTTAATGCTCCCCCTCCTAGTATGATAGATGTACTCTTCCAAGACCAGATTGGTGTTGCGAGGCCTAGGCAAATTAGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145451.p1 GENE.S_Transcript_145451~~S_Transcript_145451.p1 ORF type:5prime_partial len:790 (+),score=70.46,DPBB_1|PF03330.14|1.5e-23,RVT_3|PF13456.2|7.7e-16,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|1.8e-15 S_Transcript_145451:2-2371(+)
GTMGGACGYGNLYSQGYGTSTAALSTALFNNGLACGSCYEIRCAHDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPMQHFDLSEPVFQHIAQYHAGIVPVVYRRRVLFPEASEEQFHVIDYCLQKFCGASGEQVNYAKSTICFSKGVSDAVIDSIAQASGMEITQDLGKYLGMPTDRHMSRASFQHLLDRVNARLEGWQTKYLSMAGRVTLAKSTLSSIPYYSMQTALLPRAVCDEIDKKTRRFIWGSKEGEKKIHLANWSLVTQPKERGGLGIRSMRQANTAFLAKLGWRTLTEPGSLWSRVLRSKYCAGRCDIDMFAEHRSMSNTWKGITHAASTIRKGVRAIIGNGQRTFFWLHHWVVDHPLEHDASQTLNEDELGKTVADYWDGEQWMWDQFSHLLPPNILQKIASLHVINKSGAQDSLSWGGTSNGECTITSALEIIRMDDDGSYNPLWKKLWAVSASQRIRNFLWLCMHDSILSNANRARRNLTTDASCRECNHHEESTLHILRDCPHAKNIWAQLIPHQELERFMRAPLPEWIAANITPTDDWATLFAYAIWWLWRWRNCRTMGDANDIPDRGAEFIQAKATEYLEANSKRVAKLQGIKRPRAEAFISWQAPPMGWTKLNTDGAAKGNPGAAGGGGIFRASNGAFMKAYTVKLGTCTAFEAELQAIFHGLKFSQQMGITQLVLETDSELAHDMLIHTTPPHSPYYFLLECCKELINGPGIKVQIHHVYREANAAADWLANLSFTLLDFICVFNAPPPSMIDVLFQDQIGVARPRQIRM*

Click here to download the sequence:
Link to NCBI Protein BLAST