Transcript Information: S_Transcript_145481.p1


Annotated TAIR IDAT3G20430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7121480-7123074 | Forward length=265
E-Value2.8E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.640591317476
Replicate 215.54978895013
Replicate 314.359473482065
Condition 2: 8 Hour
Replicate 119.279411910323
Replicate 216.758248243042
Replicate 319.742722320481
Condition 3: 24 Hour
Replicate 115.718643102088
Replicate 214.049890571315
Replicate 314.612033105547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145481.p1 GENE.S_Transcript_145481~~S_Transcript_145481.p1 ORF type:5prime_partial len:271 (-),score=78.04,RNA_GG_bind|PF10258.5|4.9e-20 S_Transcript_145481:163-975(-)
CTGGAGGGTGCTGATAGCATATTAGATGCTATACATGAAGAAGTGAGCTTGGAAGACGGGGAAGATGTGGAGATGATGGATGTAGAAGAAGGAGAGGTTGTTAATGGGCAGAAGTCATGGCAAATTGGTGAAGGAGATGAAAATGAAGCAAAGGGTGGAGAACCTCATTCAATAAATTCGGAGCGTGCTAAAAACATGAAGAAGAAGAGGAAGAAGAAGCAGAAAAAGAATAAGAGAAAAGCAGGCGCTCCTGGATCAAATGGGTTAGACATTGACAGGTTTGTCCTGGATGTCTGTAAGCGGTTAAGGGAAAGAAAGTCATACCTTGTATATACGGCTGTCGGCGTTCTTGGGGTATCTGCCTTAAGTGATCTTGTGAAGGAGGTAGATGCTGTGCAGGCTTGTGGAGGACAGAAGACTGCTGATGGGTATTGCTTTAGGACTGGTGGGGGCATATTATGGAATATACTTAAAGCACGGGACCCGAATGCCTATAAGGAGATAATGAAGAAAGGAAAAGACTTTGAGAAACAATTTAGAAAACCAATGGGTGCACAAACATCGACAAGGAGTTACAATGCACCGCAAAGTGCAGAGGCAATCACCAGTAAGACTTCAGCCAGTGATGCAGATATGATCTCGAGTAAGGCTTCAGCCAGTGCTTCAGATAATGATTTTGAGATAGAAAACCCAGAAGAAGATCAACCAGCACAGCCCAGCACTGAACGAAGGTCTGTCCGTGATCGGATCAGGGTTCCGGTTTCATATGATGATGTGGTTGGAGAGGAATCACCAAATGACCAACTGGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145481.p1 GENE.S_Transcript_145481~~S_Transcript_145481.p1 ORF type:5prime_partial len:271 (-),score=78.04,RNA_GG_bind|PF10258.5|4.9e-20 S_Transcript_145481:163-975(-)
LEGADSILDAIHEEVSLEDGEDVEMMDVEEGEVVNGQKSWQIGEGDENEAKGGEPHSINSERAKNMKKKRKKKQKKNKRKAGAPGSNGLDIDRFVLDVCKRLRERKSYLVYTAVGVLGVSALSDLVKEVDAVQACGGQKTADGYCFRTGGGILWNILKARDPNAYKEIMKKGKDFEKQFRKPMGAQTSTRSYNAPQSAEAITSKTSASDADMISSKASASASDNDFEIENPEEDQPAQPSTERRSVRDRIRVPVSYDDVVGEESPNDQLA*

Click here to download the sequence:
Link to NCBI Protein BLAST