Transcript Information: S_Transcript_145489.p1


Annotated TAIR IDAT5G09580.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2972639-2974438 | Forward length=393
E-Value8.3E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1819892781194
Replicate 23.4173342521151
Replicate 33.3076646236892
Condition 2: 8 Hour
Replicate 15.5631453001216
Replicate 25.5929621599317
Replicate 35.2131149033922
Condition 3: 24 Hour
Replicate 13.7991101722773
Replicate 23.7567731145576
Replicate 32.4673739091961


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145489.p1 GENE.S_Transcript_145489~~S_Transcript_145489.p1 ORF type:complete len:368 (+),score=56.02 S_Transcript_145489:95-1198(+)
ATGGCGATCTTTATTCTCCGTCGCTTTCTCCGTCAGTCGCCAGCGCCGTCGCTGATGTTTCTCCGGTGTCTCCGGTCAGACACGGCGTTAGAGGCGATCGCAAGAGCCGCCGAGGATCGAACTCCGGTGGTAGCTCTCTACAACTTTCCCTCATTTTCCGGCGCTTTTTCAGCTCTCTTCACTCACCTCTTCCACTCTCACCTACGCACCACTTGCCTCATCCTGCCTTTTTCCTCCGTCATACCTCTCAGGGTTGATGATTTGTGTTTGGACGGGTTGAAGGCGTGTTACTTTCTTGATTTTATTGGTCCAACAGGATTTTCTGTGGAGCTTTCTCGCAGAACAGATTGCGAGGTAATATGTTTTGATCACCGGAAAAAGACACTCTCTAAGCTGCCTTCTACATCAGATTGTGCCCGGAAGCTCGCAGTTCATGTGGATATTGAGAGGAGCAGCTCTAGGGCTGTATATGAGTACTTTTCAAGCAAGCTCAAGGAAGTGAAACCTAATGATGGAAATAGTGTGATTAGTAGTTTACTGAGCCCAAAGGATCAAGATCATGTGGAGCTACTTTTGAAGTACCTTGAAGACAGCGATCTACAACAGTGGAAGCTGCCAGACATCCGGGCATTTAACATTGGGATTTCTGAATGGAGGTCAAAGCTGAATTGCATCACCAATCCGCACATGTTTGAGCAGTTGCTGGAGATGAGTGCAGAGGAACTGATACGCCAGGGAAATTCCTATATCTCAACTAGAAAGGATGCTGCTAAAGAGTTTCTGGAAAAAGCTTTTATCCTTCGGCTAGGTCGAGGTCTTTATGGGGAGTGCCTGGGAGTCAGAGCTGATGGCAATCCAGATCTTAGTGATGAAATTGGCAAAGAGCTTAGTTTGAGGAGTGCAAAAGCTGGCTTAAGGCCTATTGGAGCTGTTATTTTCATGCAACGGAATAACCTGAAAATGTGTCTGAGGAGTACTGATGTCTCTATAGACACCTCTGAAGTTGCAAAGGCATATGGTGGTGGAGGTTCTCCAAGTTCTAGCTCCTTCATCATTAGGATGGATGAATATAACCACTGGCTTTCAGTCAACTCATCATATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145489.p1 GENE.S_Transcript_145489~~S_Transcript_145489.p1 ORF type:complete len:368 (+),score=56.02 S_Transcript_145489:95-1198(+)
MAIFILRRFLRQSPAPSLMFLRCLRSDTALEAIARAAEDRTPVVALYNFPSFSGAFSALFTHLFHSHLRTTCLILPFSSVIPLRVDDLCLDGLKACYFLDFIGPTGFSVELSRRTDCEVICFDHRKKTLSKLPSTSDCARKLAVHVDIERSSSRAVYEYFSSKLKEVKPNDGNSVISSLLSPKDQDHVELLLKYLEDSDLQQWKLPDIRAFNIGISEWRSKLNCITNPHMFEQLLEMSAEELIRQGNSYISTRKDAAKEFLEKAFILRLGRGLYGECLGVRADGNPDLSDEIGKELSLRSAKAGLRPIGAVIFMQRNNLKMCLRSTDVSIDTSEVAKAYGGGGSPSSSSFIIRMDEYNHWLSVNSSY*

Click here to download the sequence:
Link to NCBI Protein BLAST