Transcript Information: S_Transcript_145892.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.04727088194
Replicate 21.225710530973
Replicate 31.6863149891255
Condition 2: 8 Hour
Replicate 10.86387576516164
Replicate 21.6312806299801
Replicate 31.2335559956586
Condition 3: 24 Hour
Replicate 10.8090697589109
Replicate 20.60331905816665
Replicate 30.90495761175764


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145892.p1 GENE.S_Transcript_145892~~S_Transcript_145892.p1 ORF type:complete len:864 (+),score=74.38,RVT_1|PF00078.23|4.4e-33,RVT_3|PF13456.2|5.5e-23,zf-RVT|PF13966.2|7.7e-22 S_Transcript_145892:186-2594(+)
ATGGCGGTCAAGATTGACTTGGCTAAGGCGTATGATCGTTTAAGATGGGATTTCATAGAGGACACCCTTATTGACGTGGGGCTCCCTATCTTGATGCGAGAAATTATTATGCTTTGTGTCACCACCCCCAAGCTACAGGTCTTATGGAATGGGGAACCAACCCAGATATTCCAACCCACACGAGGAATCCGGCAAGGCGATCCTATGTCGCCGTACCTCTTTGTGATGTGCATGGAAATATTGAGCCATCTCATTGAGGAAGCCTTAGCCACACACACTTGGAAGCCTATCCACTGCAGCAGAAATGGACCACCTCTGTCCCACTTGTTCTTTGCCGACGACATAGTGCTATTTGCCGAGGCAAACATAGAACAAGCGGTCATAATGAAGCAATGCTTACAGCGTTTCTGTGCAGCTTCTGGGGAGTTGGTCTATTTACCCAAGTCTCGAATATATTTTTCCTCCAATGTCTCGACGGAAACCAGCTCCACAATCTGTGATACCTTGGGCATAGCGGCAACAGAGGATCTTGGATTCTACTTGGGTATGCCTACTCTTCATAGTCGCGTCACAAAGAGTACTTTCCAGCACATTATTGATAAATTCGATAAGAAACTTAGTGGTTGGAAGGCCCACTGCTTATCCTTAGCGGGACGAATTACTCTAACAAAATCTGTTCTATCTACTCTAGCCTACTATTCAATGCAAACAGCAAAGCTTCCGCGATCAGTGTGTGATGAAGTGGATCACAAGATGCGGAAATTTCTTTGGGGTGGCAGTGGTGATTCTCATAAAATACACCTTGTGTCATGGGAGAAACTACAACAGGATAGAAAGCATGGGGGACTAGGTCTCCGCTCAGCCAGGCAATCAAATGCTGCTTTTTTGTCAAAACTCGGGTGGCGTATGCTAACTGAACCGGGCACTTTATGGTCTCAAGTTCTGAGGGCGAAATGTTGTCATGGTAGATGCGACCTCGACATGTTTCGTGCCCGACCCAATACTTCCAATGTGTGGCAAGGAATTACCCAGAATGCTCATATTATTCGGCAGGGCGCAACCATGGCCGTAGGGGATGGCAAGAGAACCTTCTTTTGGGATCATCGTTGGGCACTCGACGTCCCTTTAGCCCAACTAGCTACTCATGCGATCCCCTTAGAAGAACAAGACAAAACAGTTGAAGACTATTGGAATGAATCGGGAGGTTGGGAGTGGGATGCGTTTTCAGACTATTTACCAAAAACAACGCTTCAACATTTAGAATCTTTTCATTTGGTTCGCGACGAAGAAGCGGAGGATACTCTCTATTGGGGGCCAACTAGTGATGGGAAATTTTCTGTCAAATCAGCTTTCCAAATCCTTAGGCAATCTACGCCCACACCGAATGAAAAACAATGGGAATTGGCTTGGAGAGTTAAGGTTTCCCAACGCATTAAAATGTTCATCTGGTTAGTTCTTCATGATAGAATTCTCACGAATGCCAATCGCAATAGGCGAGGAATAACCGATGACCCTAGATGCAAATCTTGTGGAGCTGAGGAAGAAAACATAAGTCATGTTCTGCGGGACTGTCATTATGCGAAGACAATCTGGAATGAAATGGGTATGCCCTCTTCAAACTCCCTATTTTGGACCACTCCGGTAAATGAATGGTTAGTCGAAAATCTAGATTGCTCAGGAGTACAGGATCATCCTGACGGCCCAACAAACTTTGCCATCACCATCTGGTGGCTTTGGAAATGGCGGAATTGTCGGGTCTTCCACAGGGAAGAGGAACTTCCTCATCACCCTGTCTTGTTCTTGATACAAAAATTTAAGGAAATGAAGGAAGCACTTGAACAAGAAGACCTCCTGCAGGGTCTTCCAGCTAAGAAAAGACAGGTGGCCCAAGTGTCCTGGCATGCTCCCCCTGATGGCTGGTACTCTTTAAATACTGATGGGGCATCAAGAGGAAATCCAGGACCTGCTGCCGGAGGCGGAATTCTGCGCAACAGCAGAGGTGAGATGTTGAGGGCTTTTGCAGCAAGGTATGGAGTATGTTCTATCACTCGAGCTGAAGCCCTGGCTATATGGCAAGGGTTGCGTATGGCAAAAGAAGGTGGTTTTCGAAGACTTGTTATCCAATCTGACTCACAGGTCGTCCTCAACATGCTGAACTCTGATGATCCTTGTAGCACTGCACTACAACACATTATCCACCAATGCAGAGCCATGATTGTCAATGAAGAGTGGGAAATAAGGCTCCAACATTGCTATCGTGAAGCCAATCGTGCCGCAGATTACCTTGCCAACATGGGGGTAGACCAAGATACTGATTTACAATTCCTCTCGCAACCAACCTCGGAGCTCCATCGCATATTGACTGAAGATTTGAGGGGTGTGGCTTGGCTTAGATTGATTAGTACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145892.p1 GENE.S_Transcript_145892~~S_Transcript_145892.p1 ORF type:complete len:864 (+),score=74.38,RVT_1|PF00078.23|4.4e-33,RVT_3|PF13456.2|5.5e-23,zf-RVT|PF13966.2|7.7e-22 S_Transcript_145892:186-2594(+)
MAVKIDLAKAYDRLRWDFIEDTLIDVGLPILMREIIMLCVTTPKLQVLWNGEPTQIFQPTRGIRQGDPMSPYLFVMCMEILSHLIEEALATHTWKPIHCSRNGPPLSHLFFADDIVLFAEANIEQAVIMKQCLQRFCAASGELVYLPKSRIYFSSNVSTETSSTICDTLGIAATEDLGFYLGMPTLHSRVTKSTFQHIIDKFDKKLSGWKAHCLSLAGRITLTKSVLSTLAYYSMQTAKLPRSVCDEVDHKMRKFLWGGSGDSHKIHLVSWEKLQQDRKHGGLGLRSARQSNAAFLSKLGWRMLTEPGTLWSQVLRAKCCHGRCDLDMFRARPNTSNVWQGITQNAHIIRQGATMAVGDGKRTFFWDHRWALDVPLAQLATHAIPLEEQDKTVEDYWNESGGWEWDAFSDYLPKTTLQHLESFHLVRDEEAEDTLYWGPTSDGKFSVKSAFQILRQSTPTPNEKQWELAWRVKVSQRIKMFIWLVLHDRILTNANRNRRGITDDPRCKSCGAEEENISHVLRDCHYAKTIWNEMGMPSSNSLFWTTPVNEWLVENLDCSGVQDHPDGPTNFAITIWWLWKWRNCRVFHREEELPHHPVLFLIQKFKEMKEALEQEDLLQGLPAKKRQVAQVSWHAPPDGWYSLNTDGASRGNPGPAAGGGILRNSRGEMLRAFAARYGVCSITRAEALAIWQGLRMAKEGGFRRLVIQSDSQVVLNMLNSDDPCSTALQHIIHQCRAMIVNEEWEIRLQHCYREANRAADYLANMGVDQDTDLQFLSQPTSELHRILTEDLRGVAWLRLIST*

Click here to download the sequence:
Link to NCBI Protein BLAST