Transcript Information: S_Transcript_145894.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.060116592799768
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.23232531449571
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145894.p2 GENE.S_Transcript_145894~~S_Transcript_145894.p2 ORF type:5prime_partial len:367 (+),score=22.30,RVT_1|PF00078.23|6.1e-34 S_Transcript_145894:3-1103(+)
TTATGTAATGTGATCTATAAGACCATTACTAAAGCTATAGTGGGACGACTGAAGCCTATACTACCCCTCATGATTTCACCTACTCAGGGAGCCTTTGTCCCAGGCCGACAAATAACCGACAATATTGTTATTGTGCAAGAGGCTATCCACACTATGAGAAGTAAAAAGAGCGGCAAGGGCTTCATGGCGGTCAAGATTGACTTGGCTAAGGCGTATGATCGTTTAAGATGGGATTTCATAGAGGACACCCTTATTGACGTGGGGCTCCCTATCTTGATGCGAGAAATTATTATGCTTTGTGTCACCACCCCCAAGCTACAGGTCTTATGGAATGGGGAACCAACCCAGATATTCCAACCCACACGAGGAATCCGGCAAGGCGATCCTATGTCGCCGTACCTCTTTGTGATGTGCATGGAAATATTGAGCCATCTCATTGAGGAAGCCTTAGCCACACACACTTGGAAGCCTATCCACTGCAGCAGAAATGGACCACCTCTGTCCCACTTGTTCTTTGCCGACGACATAGTGCTATTTGCCGAGGCAAACATAGAACAAGCGGTCATAATGAAGCAATGCTTACAGCGTTTCTGTGCAGCTTCTGGGGAGTTGGTCTATTTACCCAAGTCTCGAATATATTTTTCCTCCAATGTCTCGACGGAAACCAGCTCCACAATCTGTGATACCTTGGGCATAGCGGCAACAGAGGATCTTGGATTCTACTTGGGTATGCCTACTCTTCATAGTCGCGTCACAAAGAGTACTTTCCAGCACATTATTGATAAATTCGATAAGAAACTTAGTGGTTGGAAGGCCCACTGCTTATCCTTAGCGGGACGAATTACTCTAACAAAATCTGTTCTATCTACTCTAGCCTACTATTCAATGCAAACAGCAAAGCTTCCGCGATCAGTGTGTGATGAAGTGGATCACAAGATGCGGAAATTTCTTTGGGGTGGCAGTGGTGATTCTCATAAAATACACCTTGTGTCATGGGAGAAACTACAACAGGATAGAAAGCATGGGGGACTAGGTCTCCGCTCAGCCAGGCAATCAAATGCTGCTTTTTTTGTCAAAACTCGGGTGGCGTATGCTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145894.p2 GENE.S_Transcript_145894~~S_Transcript_145894.p2 ORF type:5prime_partial len:367 (+),score=22.30,RVT_1|PF00078.23|6.1e-34 S_Transcript_145894:3-1103(+)
LCNVIYKTITKAIVGRLKPILPLMISPTQGAFVPGRQITDNIVIVQEAIHTMRSKKSGKGFMAVKIDLAKAYDRLRWDFIEDTLIDVGLPILMREIIMLCVTTPKLQVLWNGEPTQIFQPTRGIRQGDPMSPYLFVMCMEILSHLIEEALATHTWKPIHCSRNGPPLSHLFFADDIVLFAEANIEQAVIMKQCLQRFCAASGELVYLPKSRIYFSSNVSTETSSTICDTLGIAATEDLGFYLGMPTLHSRVTKSTFQHIIDKFDKKLSGWKAHCLSLAGRITLTKSVLSTLAYYSMQTAKLPRSVCDEVDHKMRKFLWGGSGDSHKIHLVSWEKLQQDRKHGGLGLRSARQSNAAFFVKTRVAYAN*

Click here to download the sequence:
Link to NCBI Protein BLAST