Transcript Information: S_Transcript_145902.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33687343335671
Replicate 20.27927581718373
Replicate 30
Condition 2: 8 Hour
Replicate 10.26994164958396
Replicate 20.28318795746489
Replicate 30.26982085575926
Condition 3: 24 Hour
Replicate 10
Replicate 20.14344184541992
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145902.p1 GENE.S_Transcript_145902~~S_Transcript_145902.p1 ORF type:internal len:158 (+),score=20.51,rve|PF00665.22|1.3e-24 S_Transcript_145902:1-471(+)
GTCTATGGCAAGCAAAGGAGAGTAAGTTTCTCACCGGGCATTCATAGAACCAAGGCAACACTTGATTATGTCCACTCTGACTTGTGGGGTCCTTCACAAGTTTCTACCGGCGCAGGTAATCGTTACATGATGACTATAATTGATGATTACTCCCGGAAAGTCTGGGTATATTTTTTGAAACATAAAAATGAGGCCTTGGACAAATTTAAAGAGTGGAAAATTTTGCTTGAAAATCAAACCGGTAAGAAACTCAAGAGATTAAGAACTGACAATGGACTTGAGTTTTGTGATAGAGAGTTTAAAGAATTTTGCAAGAAGGAAGGTGTTGCTAGCCACCTTACAATTATTGACAAGCCACAACAAAATGGTGTTGCCGAAAGAATGAACCGAACCATCATGGAGAAGGTTCATCGTATGCTCTCTACTGCCGGTTTATGGGAACGACGTCACTTGTGGGGTGAAGCGGCCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145902.p1 GENE.S_Transcript_145902~~S_Transcript_145902.p1 ORF type:internal len:158 (+),score=20.51,rve|PF00665.22|1.3e-24 S_Transcript_145902:1-471(+)
VYGKQRRVSFSPGIHRTKATLDYVHSDLWGPSQVSTGAGNRYMMTIIDDYSRKVWVYFLKHKNEALDKFKEWKILLENQTGKKLKRLRTDNGLEFCDREFKEFCKKEGVASHLTIIDKPQQNGVAERMNRTIMEKVHRMLSTAGLWERRHLWGEAAN

Click here to download the sequence:
Link to NCBI Protein BLAST