Transcript Information: S_Transcript_145951.p2


Annotated TAIR IDAT2G17890.1
Annotated Gene Namecalcium-dependent protein kinase 16
Annotated Gene Symbol(s)CPK16
Annotation TypeOrtholog
Chromosome Positionchr2:7769885-7772627 | Reverse length=571
E-Value3.2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.289247343674
Replicate 21.5700112419205
Replicate 32.1412914553993
Condition 2: 8 Hour
Replicate 11.7571482658312
Replicate 22.0947423819969
Replicate 32.5547083271888
Condition 3: 24 Hour
Replicate 13.3544577644733
Replicate 23.4802107664054
Replicate 33.2117959167564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_145951.p2 GENE.S_Transcript_145951~~S_Transcript_145951.p2 ORF type:complete len:267 (+),score=60.17,EF-hand_1|PF00036.28|6.8e-06,EF-hand_1|PF00036.28|0.018,EF-hand_1|PF00036.28|8.2e-06,EF-hand_1|PF00036.28|4.1e-05,EF-hand_5|PF13202.2|1.9e-06,EF-hand_5|PF13202.2|0.77,EF-hand_5|PF13202.2|1.3e-06,EF-hand_5|PF13202.2|4.7e-05,EF-hand_6|PF13405.2|5e-06,EF-hand_6|PF13405.2|1.5,EF-hand_6|PF13405.2|2.4e-05,EF-hand_6|PF13405.2|0.013,EF-hand_7|PF13499.2|0.0034,EF-hand_7|PF13499.2|2.4e-08,EF-hand_7|PF13499.2|4.4e-08,EF-hand_8|PF13833.2|0.057,EF-hand_8|PF13833.2|1.4e-06,EF-hand_8|PF13833.2|12,EF-hand_8|PF13833.2|5.2e-05,SPARC_Ca_bdg|PF10591.5|2.3,SPARC_Ca_bdg|PF10591.5|0.0001,Pkinase|PF00069.21|3e-07 S_Transcript_145951:1509-2309(+)
ATGTATATTGTCTTGTTTCTCTTACGCTTCAAAGACTTTTCATTTCAGGTTTTACGTAACAAGCCTGATTTTAGACGAAAACCCTGGCCTACTATAAGCAATAGTGCCAAGGATTTTGTGAGGAAATTGCTAGTGAAGGATCCTCGTGCTCGACTGACTGCTGCACAGGCACTATCTCATCCATGGGTCCGAGAAGGTGGAAATGCATCAGATATTCCCATAGATATATCAGTTCTACACAACATGCGACAATTTGTCAAGTATAGCCGTATGAAGCAGTTTGCTTTAAGGGCTTTGGCAAGTACACTTAACGAGGAAGAGCTAGCTGATCTGCGAGATCAGTTTGATGCTATTGATGTGGACAAAAGTGGAACCATCAGTCTCGAAGAAATGAGGCAGGCACTTGCCAAAGATCTTCCATGGAAACTAAAAGATTCCCGTGTTACAGAGATTGTTGAAGCGATTGACAGCAACACAGACGGCCTTGTGGATTTCACAGAGTTTGTCGCAGCAACTCTACATGTGCATCAGTTGCATGAGCATGACAATGAGAAGTGGCAACAGCTGTCACAAGCAGCCTTTGAGAAGTTTGATGTTGATAGAGATGGATTCATAACCCCTGAAGAACTGAGATTGCATACAGGTTTGAAGGGATCAGTAGATCCACTTCTAGAGGAAGCTGACATTGACAAAGATGGGAGGATCAGCCTTGCAGAATTCCGTAGGCTGCTGAGATCTGCGAGCATCAGTTCGCGGAATGTAGCCAGCCCAACCTGTCGAAGAAACTCTAGAAAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_145951.p2 GENE.S_Transcript_145951~~S_Transcript_145951.p2 ORF type:complete len:267 (+),score=60.17,EF-hand_1|PF00036.28|6.8e-06,EF-hand_1|PF00036.28|0.018,EF-hand_1|PF00036.28|8.2e-06,EF-hand_1|PF00036.28|4.1e-05,EF-hand_5|PF13202.2|1.9e-06,EF-hand_5|PF13202.2|0.77,EF-hand_5|PF13202.2|1.3e-06,EF-hand_5|PF13202.2|4.7e-05,EF-hand_6|PF13405.2|5e-06,EF-hand_6|PF13405.2|1.5,EF-hand_6|PF13405.2|2.4e-05,EF-hand_6|PF13405.2|0.013,EF-hand_7|PF13499.2|0.0034,EF-hand_7|PF13499.2|2.4e-08,EF-hand_7|PF13499.2|4.4e-08,EF-hand_8|PF13833.2|0.057,EF-hand_8|PF13833.2|1.4e-06,EF-hand_8|PF13833.2|12,EF-hand_8|PF13833.2|5.2e-05,SPARC_Ca_bdg|PF10591.5|2.3,SPARC_Ca_bdg|PF10591.5|0.0001,Pkinase|PF00069.21|3e-07 S_Transcript_145951:1509-2309(+)
MYIVLFLLRFKDFSFQVLRNKPDFRRKPWPTISNSAKDFVRKLLVKDPRARLTAAQALSHPWVREGGNASDIPIDISVLHNMRQFVKYSRMKQFALRALASTLNEEELADLRDQFDAIDVDKSGTISLEEMRQALAKDLPWKLKDSRVTEIVEAIDSNTDGLVDFTEFVAATLHVHQLHEHDNEKWQQLSQAAFEKFDVDRDGFITPEELRLHTGLKGSVDPLLEEADIDKDGRISLAEFRRLLRSASISSRNVASPTCRRNSRKL*

Click here to download the sequence:
Link to NCBI Protein BLAST