Transcript Information: S_Transcript_146131.p1


Annotated TAIR IDAT5G47500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19271262-19272845 | Reverse length=362
E-Value2.1E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2627069234135
Replicate 28.2520563539796
Replicate 36.1316109576646
Condition 2: 8 Hour
Replicate 15.8714061652366
Replicate 24.5324784257108
Replicate 34.3739011968663
Condition 3: 24 Hour
Replicate 10.11347991423685
Replicate 23.944091884715
Replicate 31.7688186985406


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146131.p1 GENE.S_Transcript_146131~~S_Transcript_146131.p1 ORF type:complete len:385 (+),score=42.71,Pectinesterase|PF01095.15|9.5e-62 S_Transcript_146131:241-1395(+)
ATGGGTTCATTATCTTATAGTTGTAGTAGCAATTTCAAGTACTTGGTATTTAGTGCTTTGCTGTACTTACTAATGTTATTATTTTTGTCGCATGCAACGTTGCAGGTCACGGGTTGCCGTCACAACCACCACCATCGTGGGAAACGAGGTGCTGCCTCACCGCTGCCACCACCACAACCACCATCGCCGAAGGCTCATACAACAAAGGGACACCATAAGTGGGTGGGGCCGACGGGCTACCGGCATATTGTCGTGGACATTGGCGGTGCTGGAGACTTTATTTCCCTCCAAGCGGCTGTGGATGCTGTGCCGGAGAATAATATGGTTAATGTCATCATCCACATTGGTCCTGGAATCTACATGGAAAAGGTAACAGTAGCAGCACAAAAGCCATACATAACATTTCAAGGGGCAGGGAGGGACGTAACGGTTATAGAATGGCACGATAGGGCCTGTGATCTCGGCTCTGACGGCCAAGAACTCCGTACCTACCGTACCGCCTCGGTTACTGTCTTTGCCAATTACTTCTCTGCCAGAAACATCAGCTTCAAGAACACGGCCCCAGCACCTTTGCCAGGCATGGAAGGATGGCAAGCAGCAGCGTTCAGGATATCAGGGGACAAGGCTTATTTCTCAGGTTGTGGATTTTATGGTCACCAGGATACTTTATGTGATGATGCTGGTCGTCATTATTTCAAAGATTGTTACATTGAGGGTTCCATTGACTTCATCTTTGGCAATGGCCGTTCCATGTACAAAGACTGCAAGATACACTCAACAGCAACGAGGTTTGGGTCGATAGCAGCACAAGACAGAAGGACCCCAGACGAGAAGACAGGGTTTGCATTCGTGAATTGCAGGGTGACAGGGACTGGACCACTCTATGTGGGCCGAGCAATGGGCCAGTATTCAAGAATTGTCTATTCTTACACTTACTTCGATGACCTTGTTGCCCATGGTGGCTGGGATGATTGGGACCATAACAGCGGCAAAAACAAGACGGCATTCTTTGGGGTTTACAAGTGCTGGGGGCCAGGAGCACAGTCAGTCCGTGGAGTGTCATGGGCGAGAGAGCTTGACTATGATACTGCCCACCCATTCCTTGCTAAGAGCTTCGTCAATGGCAGGCATTGGATAGCACCATCTGATGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146131.p1 GENE.S_Transcript_146131~~S_Transcript_146131.p1 ORF type:complete len:385 (+),score=42.71,Pectinesterase|PF01095.15|9.5e-62 S_Transcript_146131:241-1395(+)
MGSLSYSCSSNFKYLVFSALLYLLMLLFLSHATLQVTGCRHNHHHRGKRGAASPLPPPQPPSPKAHTTKGHHKWVGPTGYRHIVVDIGGAGDFISLQAAVDAVPENNMVNVIIHIGPGIYMEKVTVAAQKPYITFQGAGRDVTVIEWHDRACDLGSDGQELRTYRTASVTVFANYFSARNISFKNTAPAPLPGMEGWQAAAFRISGDKAYFSGCGFYGHQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCKIHSTATRFGSIAAQDRRTPDEKTGFAFVNCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDLVAHGGWDDWDHNSGKNKTAFFGVYKCWGPGAQSVRGVSWARELDYDTAHPFLAKSFVNGRHWIAPSDA*

Click here to download the sequence:
Link to NCBI Protein BLAST