Transcript Information: S_Transcript_146219.p1


Annotated TAIR IDAT1G56420.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21122772-21124234 | Reverse length=183
E-Value7.8E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0249022678942
Replicate 22.1583163697569
Replicate 32.0046452264783
Condition 2: 8 Hour
Replicate 14.635954416768
Replicate 23.6475840173467
Replicate 33.0120219441822
Condition 3: 24 Hour
Replicate 12.8493326292079
Replicate 21.9707662240302
Replicate 30.82245796973205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146219.p1 GENE.S_Transcript_146219~~S_Transcript_146219.p1 ORF type:3prime_partial len:92 (+),score=24.87 S_Transcript_146219:185-457(+)
ATGGAATCCTCTTGTATAACAACACCAGAGGATGTTTTGGAGTCCCTTATGAATGATGGTACTATTGATTCTCTTAGATTGAGGATTATCAATCAGCTTAAATCCAATGAAGAGCTGAAGAAAAAAACGATAACCATGGTGGAACAAAGCAAAGTCCTCAACAAACCTGGGGCAGAGAAGCAGACAAAAAGGGAGCTCTTTGATGCACTCAGGCAGGAGCTTGAAGTGCCTGTGCTGGAGAAGGCCTCTAAGTCGGTGTGGGAATTAATCTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146219.p1 GENE.S_Transcript_146219~~S_Transcript_146219.p1 ORF type:3prime_partial len:92 (+),score=24.87 S_Transcript_146219:185-457(+)
MESSCITTPEDVLESLMNDGTIDSLRLRIINQLKSNEELKKKTITMVEQSKVLNKPGAEKQTKRELFDALRQELEVPVLEKASKSVWELIL

Click here to download the sequence:
Link to NCBI Protein BLAST