Transcript Information: S_Transcript_146230.p2


Annotated TAIR IDAT5G59600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24011315-24012919 | Reverse length=534
E-Value6E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.089606064764917
Replicate 20.29714194690256
Replicate 30.4967740359219
Condition 2: 8 Hour
Replicate 10.86163193200537
Replicate 22.0338044217933
Replicate 31.5071811437866
Condition 3: 24 Hour
Replicate 10.14710359252925
Replicate 20.22892738966008
Replicate 30.42461354217367


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146230.p2 GENE.S_Transcript_146230~~S_Transcript_146230.p2 ORF type:complete len:297 (+),score=44.18,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|2.5e-13,PPR_2|PF13041.2|0.0044,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.3,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.017,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|0.24,PPR_1|PF12854.3|55,PPR_1|PF12854.3|8,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.0085,PPR_1|PF12854.3|2e-06,PPR_1|PF12854.3|0.0022,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.78,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|2.2e+02 S_Transcript_146230:112-1002(+)
ATGCTTTCCATTATTTCCAGAAAAAATACATTCCTCAAATTCTCCTGGCAAATCAACTTTACTAGCCGTTCATTATATACATCCTCAGATCATAAATACATCAAATGCATTGAAAAGTCTTCCCAAGATCGATCTTTGCTCTTGGGCAAAGCTTTACATGCTCATTTAGTCATCAGTGGCTTGGTCCGTAACACCCATTTTGCTTCCAAACTCATAGCAATGTACGTTGAATGTGGGGAACTCCATATTGCCCGCCAACTGTTCGACGAAATTCCCAAGTCAAACTATGCCCGATGGATAGTCCTTATTGGGGCTTATGCAAAATGTGGGTTCTACAGGCATGCTTTAGGCTTGTTGAGGGAAATGCTGGCAGTAGGTGTAAGACCCAATAACTATGTCCTTCCTAGTGCTCTGAAAGCTTGTAGGCATCTATCGGAATGGCAGGCTGGTAAGGAGATACATGCTTTGATCTTGAGGGGTTCGTTTCTGTTTGATGCGTATGTTGGTTGTGCTCTCATTGATATGTACTCTAAATGTGAATTGGTTGAGAATGCGAGGAGGGTTTTCGATAGCATGATTGAGAAGGACTTGGTTGCCTTAAATGCAATGATTGCTGGGTATGCTCAAGCAGGGATAGTGAAGGAGGCTCTGGGTTTGGTAGAGAATGGTCAGTTGATGGGTTTGCGGCCTAATGTTGTAACTTGGAATACATTAATTGCTGGATTTTCGCAAGAAGGGGATCATTTAATGGTGGATGAGCTGTTTCGGTTGATGCGTGTTAATGGGATTGAGCCTGATGTGGTGTCCTGGACTTCTATCATATCCGGGCTGGTGAAGAATTTTCAGAATAGTGAAGCTTTTGTGACATTTTGGCAAAATGTTGGATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146230.p2 GENE.S_Transcript_146230~~S_Transcript_146230.p2 ORF type:complete len:297 (+),score=44.18,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|2.5e-13,PPR_2|PF13041.2|0.0044,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.3,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.017,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|0.24,PPR_1|PF12854.3|55,PPR_1|PF12854.3|8,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.0085,PPR_1|PF12854.3|2e-06,PPR_1|PF12854.3|0.0022,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.78,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|2.2e+02 S_Transcript_146230:112-1002(+)
MLSIISRKNTFLKFSWQINFTSRSLYTSSDHKYIKCIEKSSQDRSLLLGKALHAHLVISGLVRNTHFASKLIAMYVECGELHIARQLFDEIPKSNYARWIVLIGAYAKCGFYRHALGLLREMLAVGVRPNNYVLPSALKACRHLSEWQAGKEIHALILRGSFLFDAYVGCALIDMYSKCELVENARRVFDSMIEKDLVALNAMIAGYAQAGIVKEALGLVENGQLMGLRPNVVTWNTLIAGFSQEGDHLMVDELFRLMRVNGIEPDVVSWTSIISGLVKNFQNSEAFVTFWQNVGF*

Click here to download the sequence:
Link to NCBI Protein BLAST