Transcript Information: S_Transcript_146233.p3


Annotated TAIR IDAT5G59600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24011315-24012919 | Reverse length=534
E-Value4E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10355253398903
Replicate 20
Replicate 30.35880809501168
Condition 2: 8 Hour
Replicate 10.41489086220103
Replicate 20.52229996824265
Replicate 30.41470520632259
Condition 3: 24 Hour
Replicate 10.084999546656009
Replicate 20.088186037262052
Replicate 30.098140250603565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146233.p3 GENE.S_Transcript_146233~~S_Transcript_146233.p3 ORF type:complete len:257 (+),score=61.78,PPR|PF01535.16|5e+03,PPR|PF01535.16|0.00081,PPR|PF01535.16|8.8e-09,PPR|PF01535.16|0.06,PPR|PF01535.16|0.0066,PPR|PF01535.16|7.4,PPR|PF01535.16|8.8,PPR_2|PF13041.2|32,PPR_2|PF13041.2|0.083,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|15,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|14,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|3.4e-05,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|5.4e+03,PPR_3|PF13812.2|3.6e+03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.7e+02 S_Transcript_146233:989-1759(+)
ATGTTGGATTCTAGGCTTTGCCCTAATGGGAATACAATTAGCTGTCTCTTGTCTGCTTGTGCTAATGTGGCCAATGTAACGCATGGGAAGGAGATACATAAGTATGCATTGGTGAATGAACTTGAGCAGGATATATATGTGAGGAGTGCTCTTATTGACATGTATGCTAAGTGTGGCTGTATATACCAAGCATCAATGTTGTTTGAGAAGATGACTAGACGGAATACTCCTACTTGGAACTCAATGATCTTTGGATATGCTAATCATGGTTTTTGTAATGAGGCAATTGAACTTTTCAAGAGGATGGAAGTTGAGGGGAGAGAGAAACTTGATCACCTGACTTTCACTGCAGCTCTAATGGCCTGTAGTCATGGTGGCATGATGGAACTTGGGAAAACCTTGTTCAAATCAATGCAAGAAACTTACAACATTAGGCCAAGACTCGAGCATTATGCATGCCTGGTGGATCTTCTTGGTCGAGCAGGAAAGTTAATGGAGGCCTATGATTTAATCAAAGAAATGCCAATAAAACCTGATTTATTTGTATGGGGGGCATTACTAGGAGCTTGTAGACAGCATGGTAACATAGAGCTCGCTGAAGTAGCAGCTAGGGAATTGTCTATGCTTGAGCCTCAGGGTGCAGGTACAAGTCTGCTGTCAAATTTATATGCTGGAAGGGGAAATTGGGATAATGCTGCACGGCTGAAGAAGCTGATGAAGAAGAAGAAAATGAAAAGTTTTCAGGGTTGCAGCTGGGTAGAGGCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146233.p3 GENE.S_Transcript_146233~~S_Transcript_146233.p3 ORF type:complete len:257 (+),score=61.78,PPR|PF01535.16|5e+03,PPR|PF01535.16|0.00081,PPR|PF01535.16|8.8e-09,PPR|PF01535.16|0.06,PPR|PF01535.16|0.0066,PPR|PF01535.16|7.4,PPR|PF01535.16|8.8,PPR_2|PF13041.2|32,PPR_2|PF13041.2|0.083,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|15,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|14,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|3.4e-05,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|5.4e+03,PPR_3|PF13812.2|3.6e+03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.7e+02 S_Transcript_146233:989-1759(+)
MLDSRLCPNGNTISCLLSACANVANVTHGKEIHKYALVNELEQDIYVRSALIDMYAKCGCIYQASMLFEKMTRRNTPTWNSMIFGYANHGFCNEAIELFKRMEVEGREKLDHLTFTAALMACSHGGMMELGKTLFKSMQETYNIRPRLEHYACLVDLLGRAGKLMEAYDLIKEMPIKPDLFVWGALLGACRQHGNIELAEVAARELSMLEPQGAGTSLLSNLYAGRGNWDNAARLKKLMKKKKMKSFQGCSWVEAA*

Click here to download the sequence:
Link to NCBI Protein BLAST