Transcript Information: S_Transcript_146272.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.19698919247781
Replicate 30.49400185938216
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.19032006790162
Condition 3: 24 Hour
Replicate 10
Replicate 20.2023554605031
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146272.p1 GENE.S_Transcript_146272~~S_Transcript_146272.p1 ORF type:5prime_partial len:112 (+),score=7.71 S_Transcript_146272:1-336(+)
CACTGCACTGTTGTCCATATCGCACACACTTGTGGTCCAAAAATCTCCAGAAGTGCTAGGTATCCTTCTTGTTTGTCCTCGAGTTCTCAGTTCTCTTGGTTGCTTGTCCAAGGATGCTATAGACTCAGGCTTCATACAACATGCAAGATAAGCACTGCTCCCATTCACACAAAATGTAAGATTGAAAACCAAGATTTGGTCTTTATAAATTCCCAAATCCTCACAACATCGATTCCAGGAAGACCCAGATCACAGCGCCCTGGTCCTGATTATAACTCTGAGATCAGCAACAAGAAGCCCTTTTTTCCTGGAATCGAGTTGCAGGTGTTGTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146272.p1 GENE.S_Transcript_146272~~S_Transcript_146272.p1 ORF type:5prime_partial len:112 (+),score=7.71 S_Transcript_146272:1-336(+)
HCTVVHIAHTCGPKISRSARYPSCLSSSSQFSWLLVQGCYRLRLHTTCKISTAPIHTKCKIENQDLVFINSQILTTSIPGRPRSQRPGPDYNSEISNKKPFFPGIELQVLC*

Click here to download the sequence:
Link to NCBI Protein BLAST