Transcript Information: S_Transcript_146308.p1


Annotated TAIR IDAT1G09190.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2966263-2967717 | Reverse length=484
E-Value2.7E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60681110308229
Replicate 20.64679187627894
Replicate 30.96118494246778
Condition 2: 8 Hour
Replicate 11.875522926914
Replicate 22.0404291918969
Replicate 31.9441163939397
Condition 3: 24 Hour
Replicate 10.85387166738479
Replicate 21.2549993381039
Replicate 31.7252864251057


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146308.p1 GENE.S_Transcript_146308~~S_Transcript_146308.p1 ORF type:complete len:307 (+),score=41.63,PPR_2|PF13041.2|7.1e-09,PPR_2|PF13041.2|13,PPR_2|PF13041.2|4.3e-07,PPR_2|PF13041.2|1.2e-08,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|2.8,PPR|PF01535.16|1.5,PPR|PF01535.16|2e-07,PPR|PF01535.16|5.6e-09,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.8e-07,PPR_1|PF12854.3|8e-06,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.00036 S_Transcript_146308:256-1176(+)
ATGAGGTGGACAAGCCGAGAGGTGGAGAAGAAGATTCTTCGCCATCTCCATGACCGTAAAACCCGAACTCAGGTCCTCGAAATCCACGCTCACTTCCTCCGTTATGGGCTGGATCAATCAAACCAGGTCCTCTCTCACTTTATCTCTGTTTGTAGAGCACAGGGTAAAATGAAGTACTCAGAGCTTGTATTTCAGCAAGCCGAGTTCCCGGATCTCCTCCTTTTCAATTCCATGATAAAGGGTTATTCGCTTTCTGGGCCCTTTGCGCGATCACTATCTCTCTTTTCTTGTATGAAAAATCGTGAGGTTTTGCCCAATGAATACACTTTTGCTCCTTTAATCAAGTCTTGTTGTAATCTTGGTGATGTAAGGGCAGGTAGATGTGTTCATGGTGAGATTATTAAACTTGGGCTTGAGCGTCGTAGCGCTTTGAGAATTGGGACTGTCGAGTTGTATGCCAACTGTGAGAAAATGGATGATGCCTTGATGGTGTTCGATGGAATGCCTCACAGAAATGTGATCATTTGGAACTTAATGATTCGTGGGTTTTGTAAGGTTGGGGATGTTGATATGGGTTTGCATCTTTTTAGGCAGATGAGAGTACGGAGCATCGTTTCGTGGAATTCGATGATATCTTCATTGGCTAAGTGTGGGAAGGACCACGAAGCTTTGGAACTATTCCATGAAATGCGAATTGATGGTGCTTTTGAACCAGATGAAGCTACTGTTGTCACTGTTCTACCTGTGTGTGCTCGAGTGGGTGCTGTTGACGTTGGAAAATGGTTACATTCCTATGCTCAATCAAGTGGATTTTTTCGAGATTTCATCACTGTTGGGAACGCCATAGTGAATTCTATTGCAAATGTGGAGACTTGGAAACTGCCTACAGAGTCTTTCGAGAAATGCCTCGGAAAAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146308.p1 GENE.S_Transcript_146308~~S_Transcript_146308.p1 ORF type:complete len:307 (+),score=41.63,PPR_2|PF13041.2|7.1e-09,PPR_2|PF13041.2|13,PPR_2|PF13041.2|4.3e-07,PPR_2|PF13041.2|1.2e-08,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|2.8,PPR|PF01535.16|1.5,PPR|PF01535.16|2e-07,PPR|PF01535.16|5.6e-09,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.8e-07,PPR_1|PF12854.3|8e-06,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.00036 S_Transcript_146308:256-1176(+)
MRWTSREVEKKILRHLHDRKTRTQVLEIHAHFLRYGLDQSNQVLSHFISVCRAQGKMKYSELVFQQAEFPDLLLFNSMIKGYSLSGPFARSLSLFSCMKNREVLPNEYTFAPLIKSCCNLGDVRAGRCVHGEIIKLGLERRSALRIGTVELYANCEKMDDALMVFDGMPHRNVIIWNLMIRGFCKVGDVDMGLHLFRQMRVRSIVSWNSMISSLAKCGKDHEALELFHEMRIDGAFEPDEATVVTVLPVCARVGAVDVGKWLHSYAQSSGFFRDFITVGNAIVNSIANVETWKLPTESFEKCLGKM*

Click here to download the sequence:
Link to NCBI Protein BLAST