Transcript Information: S_Transcript_146315.p1


Annotated TAIR IDAT1G01860.1
Annotated Gene NameRibosomal RNA adenine dimethylase family protein
Annotated Gene Symbol(s)PFC1
Annotation TypeOrtholog
Chromosome Positionchr1:304439-306275 | Reverse length=343
E-Value2.3E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8790502264497
Replicate 24.9028421238922
Replicate 36.3524979843513
Condition 2: 8 Hour
Replicate 111.492015893122
Replicate 29.5701796958831
Replicate 311.36845205599
Condition 3: 24 Hour
Replicate 15.0971394811386
Replicate 24.721627411739
Replicate 34.4138577708953


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146315.p1 GENE.S_Transcript_146315~~S_Transcript_146315.p1 ORF type:5prime_partial len:360 (+),score=66.59,RrnaAD|PF00398.16|1.2e-43 S_Transcript_146315:1-1080(+)
GTTGCATTGTTGCATACCCAAAGTCCTGGCTTTCTGTTTGTGTTATCGCCAGACAGACACGAAACAATGCTTTCCTTTGCTCAATCCTTCCCGCCAAATCCAATAACATCTCCGCTCCCCTCAAATCTTCATCATAAACCATCATTTCCACCTCTCACCAGCTTCCCCAAGCAAAAAAAATTCAAGTTTATAGCCTTTGCTGGAAACCCAGATGACTACCATGCTACTCTCAAAGCTCTCAACTCCAGAAACCGCTTTCCCAGAAAATCACTCGGCCAGCATTATATGTTGAACTCTACCATCAATGAGCAGCTTGTCTCTGTTGCCAATGTGAAAGATGGGGATGTGGTTCTTGAGATTGGGCCCGGTACTGGCTCCTTGACTAATGTTCTTATTCAAGCTGGTGCCACTGTTCTGGCCATTGAAAAGGATCCACACATGGCTGCCCTTGTTGAGGAACGATTTGCAGATAAAGGCCGCCTTACAGTTCTAGGGGAGGACTTCACAAAGTGTCATATTCGCTCCCATATGCTATCTTTATTAGAAAGTAAAGAGCTGTCAAATGCAGGAACCAGAGATGCTAAAGTGGTGGCGAATATACCATTCAACATTAGTAAGGATGTAGTGAAGCAGCTACTTCCCATGGGTGACATTTTTTCAGAAGTTGTTCTTTTACTTCAGGATGAGGCAGCTATACGGTTGGTTGAATCATCTACAAGGTCTTCCGAGTACCGCCCTATAAACATATTTGTAAATTTCTACTCAGATCCAGAGTACAACTTTAAAGTCCCACGGGAAAACTTCTTCCCTCAACCCTATGTTGATGCTGCTGTTGTCACCTTCAATCTGAAGCAGCCTTCCAACTATCCCTCAGTCTCCTCCATCAAAAGCTTCTTCTCAATGGTCAATTCTGCATTTAATGGGAAGCGGAAGATGCTGAGGAAAACACTGCAGCACATACACACATTGTCAGAAATTGAGGCCGCACTAAAGAGTGTCAGTCTGCCAGCTACTTCAAGGCCAGAGGAACTGGCACTCGATGAATTTGTAAAACTACATAACTCCATAATGAGCACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146315.p1 GENE.S_Transcript_146315~~S_Transcript_146315.p1 ORF type:5prime_partial len:360 (+),score=66.59,RrnaAD|PF00398.16|1.2e-43 S_Transcript_146315:1-1080(+)
VALLHTQSPGFLFVLSPDRHETMLSFAQSFPPNPITSPLPSNLHHKPSFPPLTSFPKQKKFKFIAFAGNPDDYHATLKALNSRNRFPRKSLGQHYMLNSTINEQLVSVANVKDGDVVLEIGPGTGSLTNVLIQAGATVLAIEKDPHMAALVEERFADKGRLTVLGEDFTKCHIRSHMLSLLESKELSNAGTRDAKVVANIPFNISKDVVKQLLPMGDIFSEVVLLLQDEAAIRLVESSTRSSEYRPINIFVNFYSDPEYNFKVPRENFFPQPYVDAAVVTFNLKQPSNYPSVSSIKSFFSMVNSAFNGKRKMLRKTLQHIHTLSEIEAALKSVSLPATSRPEELALDEFVKLHNSIMST*

Click here to download the sequence:
Link to NCBI Protein BLAST