Transcript Information: S_Transcript_146449.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value1.8E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.802100382559
Replicate 254.967864269008
Replicate 359.438303720861
Condition 2: 8 Hour
Replicate 156.664608556953
Replicate 256.121380301943
Replicate 364.678371875686
Condition 3: 24 Hour
Replicate 168.530520207635
Replicate 262.293104961275
Replicate 361.253536412425


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146449.p1 GENE.S_Transcript_146449~~S_Transcript_146449.p1 ORF type:complete len:175 (+),score=26.89,UFC1|PF08694.7|7.6e-83 S_Transcript_146449:270-794(+)
ATGGAGGGGTGGGACACAACAACGAAATCAACGCTAACCCAGATCCCACTCCTAACAACAAAGGCAGGGCCAAGAGATGGAGCAGCCTGGACTCGAAGACTAAAGGAAGAGTACAAGACTTTGATTGCTTACACATCAATGAACAAAGCCAATGACAATGACTGGTTTAGAATCTCAGCTGCTAATCCTGAAGGTACTAAATGGACTGGCAAGTGTTGGTATGTTCATAATCTTCTCAAGTATGAGTTCGATCTCCAATTCGATATTCCCGTCACTTATCCTGCCACTGCTCCTGAACTTGAGCTCCCCCAACTCGACGGCAAGACCCACAAGATGTACCGTGGAGGGAAGATTTGCTTGACTGTGCATTTCAAGCCACTTTGGGCTAAAAATTGCCCTAGGTTTGGAATAGCTCATGCTCTCTGTTTGGGTCTTGCCCCATGGCTTGCAGCCGAGATTCCCATTCTCGTGGATTCTGGAATGATCAAGCACAAGGACGATGTTGCAACTTCTAGCGATGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146449.p1 GENE.S_Transcript_146449~~S_Transcript_146449.p1 ORF type:complete len:175 (+),score=26.89,UFC1|PF08694.7|7.6e-83 S_Transcript_146449:270-794(+)
MEGWDTTTKSTLTQIPLLTTKAGPRDGAAWTRRLKEEYKTLIAYTSMNKANDNDWFRISAANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKDDVATSSDA*

Click here to download the sequence:
Link to NCBI Protein BLAST