Transcript Information: S_Transcript_146451.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value1E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.606158479822
Replicate 219.408619385182
Replicate 39.152034447501
Condition 2: 8 Hour
Replicate 113.468667568716
Replicate 214.297798002833
Replicate 37.372398419768
Condition 3: 24 Hour
Replicate 111.990048833183
Replicate 210.905894292378
Replicate 311.378365897045


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146451.p1 GENE.S_Transcript_146451~~S_Transcript_146451.p1 ORF type:complete len:133 (+),score=15.66,UFC1|PF08694.7|2.4e-47 S_Transcript_146451:270-668(+)
ATGGAGGGGTGGGACACAACAACGAAATCAACGCTAACCCAGATCCCACTCCTAACAACAAAGGCAGGGCCAAGAGATGGAGCAGCCTGGACTCGAAGACTAAAGGAAGAGTACAAGACTTTGATTGCTTACACATCAATGAACAAAGCCAATGACAATGACTGGTTTAGAATCTCAGCTGCTAATCCTGAAGGTACTAAATGGACTGGCAAGTGTTGGTATGTTCATAATCTTCTCAAGTATGAGTTCGATCTCCAATTCGATATTCCCGTCACTTATCCTGCCACTGCTCCTGAACTTGAGCTCCCCCAACTCGACGGCAAGACCCACAAGTTTGGGAATTCGTACTGTTGGATTTTGGTGGGTTGTAGATGTACCGTGGAGGGAAGATTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146451.p1 GENE.S_Transcript_146451~~S_Transcript_146451.p1 ORF type:complete len:133 (+),score=15.66,UFC1|PF08694.7|2.4e-47 S_Transcript_146451:270-668(+)
MEGWDTTTKSTLTQIPLLTTKAGPRDGAAWTRRLKEEYKTLIAYTSMNKANDNDWFRISAANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKFGNSYCWILVGCRCTVEGRFA*

Click here to download the sequence:
Link to NCBI Protein BLAST