Transcript Information: S_Transcript_146566.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3196529538106
Replicate 21.9449291069985
Replicate 30.71129009688818
Condition 2: 8 Hour
Replicate 10.76371921245931
Replicate 20.98608699238464
Replicate 31.5854762681391
Condition 3: 24 Hour
Replicate 11.6248260447549
Replicate 22.3100854774789
Replicate 32.7792886396822


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146566.p1 GENE.S_Transcript_146566~~S_Transcript_146566.p1 ORF type:complete len:363 (+),score=39.10,PIF1|PF05970.10|3.1e-61 S_Transcript_146566:1641-2729(+)
ATGGCGAGGAAAGAAAACGTAGAAGCTGTCGATCGGCTATTACGTGACATCTGCAACAGCCCACAACCATTTGGAGGCAAAGTATTTGTGTTTGGTGGAGATTTCAGGCAAGTGTTGCCTGTTATTCCTAAACGAGCACAGCATGAGCTTGTCGATGCTAGCCTTGTTAGCTCCTATCTATGGCCACTTTTCCATCGATTCACGCTTGTTGAGAATATGCGTGCCAAAGAGGACACTGAATTCACAGCTTTCCTGCTTAGGCTCGGCAATGGTGAATTTCAGAACACTGAGCACGCTTGTATTACATTGCCACCTTCTTTGCTCTTTAAACTCCCACCAACTGAAAACTGCTTGGATTATCTTGTCGAATCAGTGTACACTGATATCAATGAATTGGCACGTAATCCTCATGCCTTTACTGCGCGAGCAACATTGACTCCAACGAATGATGAAGTGGATTGTATCAACCAAATTGTGATAGACAAATTCCCTGGACAACCATATGTTTATAAAAGCTATGACAGCACCATTGATGATGATTGCAATGGTCATCCAGTTGAATTTCTCAACACACTATGTCCAGGAGGAATGAGCCCACACAAGCTTACACTGAAACTCAACTGTCCTGTCATATTGCTACGAAATCTAAACCCTTCTATTGGCCTGTGTAATGGAACAAGGCTCATTTGCAGAGGCTTCAAGTGCAACATCATTGTTTGTGAGATAGCAACAGGTTATCGAGCTGGGGAATATGTCTTCATACCCCGCATAAATCTCAGGCCTTCGACATCAGTTACATATCCATACAAGTTTGAAAGGCGACAATTTCCAATCAAGTTGTGCTTTGCCATGACAATCAACAAATCCCAAAGGCAAACACTCACAGACGTTGCAATTTACCTACGAAAGCAGTGCTTCTCACACGGCCAACTCTACGTAGCTCTATCCAGAGCCAAGAAAGCCAGCAGCGTGAAAGTCTTCATTCATGACAATGAAACAAATGAAAGACCACCAAACTCTGTTTCTAATGTTGTTTCATTTGACTTGCTAAAGAAGGCCGGCATACTGTCACCACAATTTCAGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146566.p1 GENE.S_Transcript_146566~~S_Transcript_146566.p1 ORF type:complete len:363 (+),score=39.10,PIF1|PF05970.10|3.1e-61 S_Transcript_146566:1641-2729(+)
MARKENVEAVDRLLRDICNSPQPFGGKVFVFGGDFRQVLPVIPKRAQHELVDASLVSSYLWPLFHRFTLVENMRAKEDTEFTAFLLRLGNGEFQNTEHACITLPPSLLFKLPPTENCLDYLVESVYTDINELARNPHAFTARATLTPTNDEVDCINQIVIDKFPGQPYVYKSYDSTIDDDCNGHPVEFLNTLCPGGMSPHKLTLKLNCPVILLRNLNPSIGLCNGTRLICRGFKCNIIVCEIATGYRAGEYVFIPRINLRPSTSVTYPYKFERRQFPIKLCFAMTINKSQRQTLTDVAIYLRKQCFSHGQLYVALSRAKKASSVKVFIHDNETNERPPNSVSNVVSFDLLKKAGILSPQFQD*

Click here to download the sequence:
Link to NCBI Protein BLAST