Transcript Information: S_Transcript_146679.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33059628863578
Replicate 20.13703595998456
Replicate 30
Condition 2: 8 Hour
Replicate 10.13245584047909
Replicate 20.13895558161321
Replicate 30.26479313795008
Condition 3: 24 Hour
Replicate 10.13568250615276
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146679.p1 GENE.S_Transcript_146679~~S_Transcript_146679.p1 ORF type:complete len:161 (+),score=19.87,zf-RVT|PF13966.2|1.2e-15,zf-RVT|PF13966.2|1.6e+03 S_Transcript_146679:238-720(+)
ATGGACTGGACAAAAGTGGTGTGGTATCCCATAAATATTCCTAAACATTCTGTTATTGCTACCTTAGCAATACAGAATGGTTTGCCTACAGTGGATAATATCATTAGCAGAGGAGTGCAGATGCCCAACAGATGCAGCCTTTGCAAAAATCAGCAAGAAACTGTTAAGCATCTTTTCTTTGATTGTGTGATAGCTTCTACAGTCTGGCAGGGGATTCTTCTTTGGCTGAGGCTCACCAGGAAAGGAATGAATCTTAAAAGAGAAATGAAATGGTATGTGCCTCATGTGAGGGGCAAGCATTGGAAGAAAAAGTGGAGAAGGTGCGCACTTTTGGCTGTTGTGTATGAAATCTGGAGGGAACGAAACACTAGAATTTTTGAAGGGAAAGAAAGGGATCCAGTTCAGATTATCAAGCAGATTAAATTTGTAGTTTGCGCTAGAATTTTGTATAGATTTAGTCTTCCTATAGAAAGACTGCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146679.p1 GENE.S_Transcript_146679~~S_Transcript_146679.p1 ORF type:complete len:161 (+),score=19.87,zf-RVT|PF13966.2|1.2e-15,zf-RVT|PF13966.2|1.6e+03 S_Transcript_146679:238-720(+)
MDWTKVVWYPINIPKHSVIATLAIQNGLPTVDNIISRGVQMPNRCSLCKNQQETVKHLFFDCVIASTVWQGILLWLRLTRKGMNLKREMKWYVPHVRGKHWKKKWRRCALLAVVYEIWRERNTRIFEGKERDPVQIIKQIKFVVCARILYRFSLPIERLL*

Click here to download the sequence:
Link to NCBI Protein BLAST