Transcript Information: S_Transcript_146680.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.30483861295207
Condition 2: 8 Hour
Replicate 10.52872868554875
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1873042279037
Replicate 30.20844664797617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146680.p1 GENE.S_Transcript_146680~~S_Transcript_146680.p1 ORF type:complete len:121 (+),score=21.04,zf-RVT|PF13966.2|6.1e-16,zf-RVT|PF13966.2|4e+03 S_Transcript_146680:238-600(+)
ATGGACTGGACAAAAGTGGTGTGGTATCCCATAAATATTCCTAAACATTCTGTTATTGCTACCTTAGCAATACAGAATGGTTTGCCTACAGTGGATAATATCATTAGCAGAGGAGTGCAGATGCCCAACAGATGCAGCCTTTGCAAAAATCAGCAAGAAACTGTTAAGCATCTTTTCTTTGATTGTGTGATAGCTTCTACAGTCTGGCAGGGGATTCTTCTTTGGCTGAGGCTCACCAGGAAAGGAATGAATCTTAAAAGAGAAATGAAATGGTATGTGGCTCATGTGAGGGGCAAGCATTGGGAGAAAAAAACGGAAGAGATGTGCACTATTGCTGCTGTTTATGAAATTTGGAGGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146680.p1 GENE.S_Transcript_146680~~S_Transcript_146680.p1 ORF type:complete len:121 (+),score=21.04,zf-RVT|PF13966.2|6.1e-16,zf-RVT|PF13966.2|4e+03 S_Transcript_146680:238-600(+)
MDWTKVVWYPINIPKHSVIATLAIQNGLPTVDNIISRGVQMPNRCSLCKNQQETVKHLFFDCVIASTVWQGILLWLRLTRKGMNLKREMKWYVAHVRGKHWEKKTEEMCTIAAVYEIWRE*

Click here to download the sequence:
Link to NCBI Protein BLAST