Transcript Information: S_Transcript_146904.p1


Annotated TAIR IDAT1G06270.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1918242-1919273 | Reverse length=343
E-Value8E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2353232369527
Replicate 24.1400483967783
Replicate 33.3293300293436
Condition 2: 8 Hour
Replicate 14.609526173062
Replicate 24.8357202522925
Replicate 35.3163040344965
Condition 3: 24 Hour
Replicate 13.8397182382517
Replicate 23.5529965891661
Replicate 33.3549512747898


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_146904.p1 GENE.S_Transcript_146904~~S_Transcript_146904.p1 ORF type:5prime_partial len:421 (+),score=50.07,PPR_2|PF13041.2|3.6e-09,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|5e+02,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|3.9e-05,PPR_1|PF12854.3|0.005 S_Transcript_146904:1-1263(+)
CAGGCCCAGGACCGCATGATACAAATGTTTGTGTATATATGTACACGCATATATTCAACTCGTCGCCGGTCACCAACACCCACACCATCGGAAGGTTATCCGCAGCACCCACGCTCAGCCTTGACCGCCCAATGCCCTCCCGCCGGTCCGCACGCACAGCCCTGCACTCGACGCCCACACTGCCGCCCACACTGCAGCCGCACCACTACTCTGTTTCAGTTTGTCAATATGGCTCTAATATTAGCAGCCAAGAGTATCAGAGTTCGTCATCATTTTTGGCACCCTTTGTTCAGGGTCTCTGCCGCTTTTGCAGCTGCTCCTGCACGATTACTCGAGGAATCTGTGAAGGTGGCAGTCACCAACAAACAATATGAGCAAATCCCAGATTTTCTTACATCCTCAGAACAATCCTGCAAGTCACAAAACCCCTTCTCATTTCTTTCCTCATTCACACCAAGTCATAGAGCTCAAGTAGTTGATGAAATGTTACAGTCTTTCATTCCTATCAAACCCCATACCCGCCTTAAAATTGTTTATCAATATCTACTTACCTACACCCTTCAAAACTCAGAACCTTTTCCACTTGCTCTTGTTACCCTTCAACGTACGCTTCGTTCGGGCTGCACCCCTGTCCCACAGACCCATTTACTCCTTTCATCTGCTTGGATTGATTATCGATCCCAATATCACTCAATACCCAGCATTCTTCTAGGCATGAAGACTATTGGGTATTGCCCAGATACTGGAACTTGCAATTTCATTATCACATCTCTTTGTGCTGTTGACCAGTTGGAGGAGGCTGTTGAAGTGTTAAGGGGGATGATTAAGGCAATGTGTATTCCTGATGTTGAGAGTTATGGTGCTGTAATAGCTGCATTCTGTACTGTCAGGAAGACTGTTAAGGCAATAACATTGATGAAGGAAATGGCAGGAAAACTTCACCTGTCGCCTAGGCAAGGAACATTAGTGAAATTAGCAGCATCTTTACGTGCAAATAAGGAGATTTGGAGAGCTGCTGAGCTGATCGAGTTCTTGGAGAAAAAGGGTTTCCATGTCGAGTTTGAGTGCTATGAGCTTGTGCTAGAGGGTTGCTTGGAGTGTAAGGAGTTCATTTTGGCTGGAAAGATGGCGATGATGATGACTGAGAAAGGGTATATACCATACGTTAAGGTGAGACAGAACGTTGTTGAGGGGTTGGCTGGGGTTGGTGAGTGGCAGCTCGCCTGTGCTGTAAGGCACAGATTTGCAGAGCTGAACTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_146904.p1 GENE.S_Transcript_146904~~S_Transcript_146904.p1 ORF type:5prime_partial len:421 (+),score=50.07,PPR_2|PF13041.2|3.6e-09,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|5e+02,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|3.9e-05,PPR_1|PF12854.3|0.005 S_Transcript_146904:1-1263(+)
QAQDRMIQMFVYICTRIYSTRRRSPTPTPSEGYPQHPRSALTAQCPPAGPHAQPCTRRPHCRPHCSRTTTLFQFVNMALILAAKSIRVRHHFWHPLFRVSAAFAAAPARLLEESVKVAVTNKQYEQIPDFLTSSEQSCKSQNPFSFLSSFTPSHRAQVVDEMLQSFIPIKPHTRLKIVYQYLLTYTLQNSEPFPLALVTLQRTLRSGCTPVPQTHLLLSSAWIDYRSQYHSIPSILLGMKTIGYCPDTGTCNFIITSLCAVDQLEEAVEVLRGMIKAMCIPDVESYGAVIAAFCTVRKTVKAITLMKEMAGKLHLSPRQGTLVKLAASLRANKEIWRAAELIEFLEKKGFHVEFECYELVLEGCLECKEFILAGKMAMMMTEKGYIPYVKVRQNVVEGLAGVGEWQLACAVRHRFAELNS*

Click here to download the sequence:
Link to NCBI Protein BLAST