Transcript Information: S_Transcript_14719.p1


Annotated TAIR IDAT5G03800.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)EMB175, emb1899, EMB166
Annotation TypeOrtholog
Chromosome Positionchr5:1010894-1013584 | Reverse length=896
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7876704542719
Replicate 211.766821097341
Replicate 312.56155246583
Condition 2: 8 Hour
Replicate 112.605675165239
Replicate 214.317983129425
Replicate 312.055296034373
Condition 3: 24 Hour
Replicate 113.495283578634
Replicate 211.911092084014
Replicate 311.518066945003


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14719.p1 GENE.S_Transcript_14719~~S_Transcript_14719.p1 ORF type:complete len:900 (+),score=155.06,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|4.8e-13,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|4.5e-09,PPR_2|PF13041.2|88,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|4.5e+03,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|0.94,PPR_2|PF13041.2|4.8e-08,PPR_2|PF13041.2|8.5e+02,PPR_2|PF13041.2|7.7e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|1e+04,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.0049,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|5.5,PPR|PF01535.16|0.00036,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|97,PPR|PF01535.16|0.004,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.19,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|11,DYW_deaminase|PF14432.2|4.5e-33,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|1.8e-06,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|3.8,PPR_1|PF12854.3|9.4,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|24,PPR_1|PF12854.3|1.4,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.00097,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|34,PPR_3|PF13812.2|31,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|53,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|9.4e+03 S_Transcript_14719:133-2832(+)
ATGGCCTCATCCTCGACTTTAACCTTTCACTTCTCTCCTCCATCTCACACTCTTCTCCAACCCCAACCTCTTCACTTCCCTCCTAAATTCTCACTCCCTTCTTCACTTTCTCTCTCCAAATTCAACCCCCTCCATTCCCAACTCTCATTCTCTGCTCAATTTCTTCAAAACCCTCAAATTTCTTCCATAAATAACCATACCCATTTGCCCATTTCAGCTTCTCAACCTGACCCTTACCCATTTTCAGATACCCAGTTTTTGTATAACAAGTGCCTTGAGTTGCTTCACTTATCTGTTCGTTATGATGATGTTGAACTAGCTAGAGCAGTTCATTCTTTAATTCTCAAGTTTGAAGGAGATAATTACTTATTTAATTCCTTGATTGCTTCTTATCTTTACCTGGGTTTGTTTTCTGATGCTTTTAATGTTTTTAGTGGACTTTCAAACCCTGATGTTGTGTCTTATACTACACTCATTTCTGGGTTTGCTAAAGTTGGGTATGAATTTGATGCTATAAAGCTTTTCTTGAGGATGAGGGATGAAGGTGTTGAACCAAATGAGTTTACTTTTGTTGCTTTTTTAAGTGCTTGTAGTAGAATTTGTGAGTTGAACCTAGGGTTTCAAGTTCATTGCTTGCTTGTCAAAACTGGGTTTTTGTGGGGTTCATATGTGTCAAATGCCCTGATGAGTTTGTATGTGAAATGTGGGTGTTTGGATTATGCACTCCAGGTGTTTGCTGAAATGCCTGAGAGAGATATTGTATCATGGAACACTGTTATCTCAGGTGTTGCTGGTGTGTGTATGTATGATAGAGTGTTTGAATGGTTTCGAGAGATGCAGAGAATTGATGGGTTTAGGGTTGATCAGTTTACTGTCTCTAGTATGTTGAATGCCTGTGCTGGGTGTTGTGCTGAAATGCAGGGCAAGGAAATTCATGCTCATGCGCTAAGGGCTGGATTTGAGAGTAATTTAAGCATCGATAACGCACTCATTAGCTTTTACACTAAGTGTGGGGGTGCTAAAAATGTGCAGGTTTTGTTTGAGAGAATGCCTACCAAGGATGTCATTTCTTGGACTGGTATGGTTACTGCTTACATGAAGTTTGGGATGGTGGAGCGAGCTGTCGAGACATTTAGCATGATGCCGGATAGAAATCCTGTCTCTTTCAATGCCCTTTTGGCTGGCCTTTGTCAAAATGGGGAGGGTTTAAAAGCTTTGTCTCTGTTTTACAGAATGATTAGTCATGGTGTTGAATTAACAGAGAGCACATTAACAAGTGCCATTACTGCTTGCAGCTTGCTTGCAGAAAAGAGTATTAGTGAGCAGATACACAGTTTCATCGTTAAGTGTGGGTTTGGGTCAAATGCTTGTATTGAAGCAGCATTACTAGATATGTGCACAAGGTGTGGGAGGATGGCAGATGCTCAAATGATGTTCTTCAATAGTCAGTATGACGAGAATCTGTCAATAAATTGGACGTCACTCATATGTGGTTATGCTCGAAATGTGCAGCCAGATGAAGCACTTGCTCTGTTCCAGTGGGGGCAAGTAGAAGAAGCCATGGTACTTGATGCAGTTGTAGCATCTGTTGTACTTGGTGTATGCGGAACATTAGGGTTTCATGAGTTTGGTGAACAGATTCATTGCTATGCCCTGAAGTCAGGGTATCTTGACGATGTTGGGGTAGGCAACGCCATTGTCAGTATGTATTCCAAGTGTGGTTACATAGAAGATGCAACAAAAGTTTTCAATCTCTTGCCAGTACATGATGTAGTGTCATGGAATTGTTTGATATCTGGTCATATTCTTCAGAGGCAAGGTGATGATGCTTTAGCTCTATGGTCCAGGATGAAGGGAACACTCATAAGGCCTGATTCCGTTACCCTTGTTCTGGTAATTTCTTCTTACAGGCATACCAACTCAAATATGCTTGATGATTGCAGGAGTTTGTTTTTCTCCATGAGGGAGACCTATGATATTGAGCCAACCTCGGATCATTATGCTTCCTTTGTAAGCGTTCTAGGTCGTTGGGGCGCCCTTGAAGAGGCAGAGGATATAGCATCCAAGATTCCTTTTGAGCCAAAAACCTCTGTTTGGCGAGCTTTACTTGATAGCTGTCGAATCCATTTGGACTCAACAGTTGGGAAAAGAGTAGCCAAGCGCATCTTGGCATTGCAGCCAGAAGATCCTTCTACCTATATACTCGTATCAAACTTGTTTTCTGCATCTGGTAGATGGCATTGCTCTGAGATGGTCAGGGAGGAAATGAGGCAGAAAGGGTTTCAAAAGCATCCAGCGCGTAGTTGGATAGTTCATCAAAACAAGGTTCATTCATTTTACACCAGAGATAGATCACATTCCCAATCAAAAGACATATATAGTGGGCTGGATATACTAATCTTAGAGTGCCGAAAAGCTGGATATTTGCCTGATACACGCTTTGTTCTTCATGAAGTAGAAGAGCACCAAAAGGCTGACTTTTTGTTCTATCATAGTGCAAAATTAGCAGCTACATATGGGCTTTTGATGACAAAGACAGCCAAACCTATTAGAGTTACAAAGAATGTTCTTCTATGTGGTGATTGCCATAACTTTTTCAAATACTTATCTAAAGTCACTAGTCGGGAGATATGTGTAAGAGACACCTCAGGATTTCATAGCTTCTCTGATGGAAAATGTTCGTGTAACGATCATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14719.p1 GENE.S_Transcript_14719~~S_Transcript_14719.p1 ORF type:complete len:900 (+),score=155.06,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|4.8e-13,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|4.5e-09,PPR_2|PF13041.2|88,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|4.5e+03,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|0.94,PPR_2|PF13041.2|4.8e-08,PPR_2|PF13041.2|8.5e+02,PPR_2|PF13041.2|7.7e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|1e+04,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.0049,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|5.5,PPR|PF01535.16|0.00036,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|97,PPR|PF01535.16|0.004,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.19,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|11,DYW_deaminase|PF14432.2|4.5e-33,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|1.8e-06,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|3.8,PPR_1|PF12854.3|9.4,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|24,PPR_1|PF12854.3|1.4,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.00097,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|34,PPR_3|PF13812.2|31,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|53,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|9.4e+03 S_Transcript_14719:133-2832(+)
MASSSTLTFHFSPPSHTLLQPQPLHFPPKFSLPSSLSLSKFNPLHSQLSFSAQFLQNPQISSINNHTHLPISASQPDPYPFSDTQFLYNKCLELLHLSVRYDDVELARAVHSLILKFEGDNYLFNSLIASYLYLGLFSDAFNVFSGLSNPDVVSYTTLISGFAKVGYEFDAIKLFLRMRDEGVEPNEFTFVAFLSACSRICELNLGFQVHCLLVKTGFLWGSYVSNALMSLYVKCGCLDYALQVFAEMPERDIVSWNTVISGVAGVCMYDRVFEWFREMQRIDGFRVDQFTVSSMLNACAGCCAEMQGKEIHAHALRAGFESNLSIDNALISFYTKCGGAKNVQVLFERMPTKDVISWTGMVTAYMKFGMVERAVETFSMMPDRNPVSFNALLAGLCQNGEGLKALSLFYRMISHGVELTESTLTSAITACSLLAEKSISEQIHSFIVKCGFGSNACIEAALLDMCTRCGRMADAQMMFFNSQYDENLSINWTSLICGYARNVQPDEALALFQWGQVEEAMVLDAVVASVVLGVCGTLGFHEFGEQIHCYALKSGYLDDVGVGNAIVSMYSKCGYIEDATKVFNLLPVHDVVSWNCLISGHILQRQGDDALALWSRMKGTLIRPDSVTLVLVISSYRHTNSNMLDDCRSLFFSMRETYDIEPTSDHYASFVSVLGRWGALEEAEDIASKIPFEPKTSVWRALLDSCRIHLDSTVGKRVAKRILALQPEDPSTYILVSNLFSASGRWHCSEMVREEMRQKGFQKHPARSWIVHQNKVHSFYTRDRSHSQSKDIYSGLDILILECRKAGYLPDTRFVLHEVEEHQKADFLFYHSAKLAATYGLLMTKTAKPIRVTKNVLLCGDCHNFFKYLSKVTSREICVRDTSGFHSFSDGKCSCNDHW*

Click here to download the sequence:
Link to NCBI Protein BLAST