Transcript Information: S_Transcript_147340.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1.4E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9577380218983
Replicate 22.4852337662488
Replicate 30.93273607779129
Condition 2: 8 Hour
Replicate 13.7748392055615
Replicate 23.9600743569171
Replicate 36.664264998339
Condition 3: 24 Hour
Replicate 10.70305372153636
Replicate 22.1882300832335
Replicate 31.6234879157316


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_147340.p1 GENE.S_Transcript_147340~~S_Transcript_147340.p1 ORF type:5prime_partial len:435 (+),score=45.63,RPE65|PF03055.11|7.3e-82 S_Transcript_147340:1-1305(+)
GGTGACGGCATGTTGCACAGCATCCGAATATCAAATGGCAAGGCCACGCTTTGTAGTCGCTTTGTCAAGACATACAAGTACATGGTAGAACATGAAGCGGGAACCAGTCTTCTTCCAAACATCTTTGCTGGGGTCAATAGCCTGCCGGGGTTTCTGGCTCGGTTAACTCTTGCAATTGCAAGAATTGCGTCCGGACACTATCACTTGAGTGATGGTCATGGGTTAGCCAACACTAGCTTGGCCTTGTTTGGCAATCGGCTGTACGCCTTATGGGAATCCGACCTTCCATATGAGGTAAGATTGACTCCAAATGGGGATATCCAAACCATCGGTCGCTCTGATTTTGATGGCAAACTCTTGATGGGAATGACGGCACATCCTAAGATTGATTTCGACACAGGGGAGGCATTTGCCTTCCGTAGTAGCCACATTTCTCCGTTTCTCACCTTCTTTAGATTCGACTCAAGAGGGAACAAACACAAGGACGTCCCAATCTTTTCCATCCTTCAACCCTCATTCATACATGACTTTGCTATCACCAAGAAGTACGCCATTTTCGCTGACATCCAAATTCGATTGGACCCTATGAACATGATCATATGGGGCGGATCTCCATTGCGTTCGGACCCTAAAAAGGTATCAAGGGTAGGAGTCATCCCAAGGTATGCTAGCGATGAGAAGGACATGAGATGGTACGAGGTGCCAGGGTTCAACATAGTCCATGCCATCAATGCGTGGGATGAGGTGGATGAGGAGGGGAATGAAGCCATCGTCGTGGTGGCCCCCACCATGTTATCCCCCATACCCGAATTAGACAGATTGGAACTTGTTGAGTTATTGATTGAGAAAGTCAGGATCGATCTCAAGACCGGGATTGTGTCGAGGCAATCATTGTCCTTGGCAAGGAACCTGGATTTTGGAGTCATAAATCCAGCCTATGTAGGGAAGAAGAGCAGGTATATTTATGCAGCGTTTGGTGACCCAATGCCGAAAATATCCGGGGTTGTAAAACTAGATGTGTCAAAAGAGTGCATAGTGGCAAGCCAGATGTACGAGCCAGGGTGCTATGGTGGTGAGCCGTTTTTCGTGGCGAGGGACCCGGATAATCTAGATGCTAAGTATGAGGATGATGGCTATCTTGTGTCCTATGTTCATAATGAAAATACAGGGGAGTCAAGGTTCATAGTCATGGATGCTAAGTCACCTGGGCTTGATTTGCTTGCCTCTGTGAAGTTACCCCAACGTGTGCCTTATGGATTTCATGGCTTGTTTGTTAGGGATAGAGATCTTAGAAGGTTCATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_147340.p1 GENE.S_Transcript_147340~~S_Transcript_147340.p1 ORF type:5prime_partial len:435 (+),score=45.63,RPE65|PF03055.11|7.3e-82 S_Transcript_147340:1-1305(+)
GDGMLHSIRISNGKATLCSRFVKTYKYMVEHEAGTSLLPNIFAGVNSLPGFLARLTLAIARIASGHYHLSDGHGLANTSLALFGNRLYALWESDLPYEVRLTPNGDIQTIGRSDFDGKLLMGMTAHPKIDFDTGEAFAFRSSHISPFLTFFRFDSRGNKHKDVPIFSILQPSFIHDFAITKKYAIFADIQIRLDPMNMIIWGGSPLRSDPKKVSRVGVIPRYASDEKDMRWYEVPGFNIVHAINAWDEVDEEGNEAIVVVAPTMLSPIPELDRLELVELLIEKVRIDLKTGIVSRQSLSLARNLDFGVINPAYVGKKSRYIYAAFGDPMPKISGVVKLDVSKECIVASQMYEPGCYGGEPFFVARDPDNLDAKYEDDGYLVSYVHNENTGESRFIVMDAKSPGLDLLASVKLPQRVPYGFHGLFVRDRDLRRFM*

Click here to download the sequence:
Link to NCBI Protein BLAST