Transcript Information: S_Transcript_147888.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25837865276874
Replicate 20.74970644127478
Replicate 30.44763922533011
Condition 2: 8 Hour
Replicate 10.41408524887637
Replicate 21.7376193118234
Replicate 31.5521248256054
Condition 3: 24 Hour
Replicate 10.31812937122224
Replicate 20.55009251398901
Replicate 30.8570597613389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_147888.p1 GENE.S_Transcript_147888~~S_Transcript_147888.p1 ORF type:internal len:206 (+),score=38.58,RVT_1|PF00078.23|3.7e-20 S_Transcript_147888:3-617(+)
GTGGATGATGCAAGGAGATCGGATTTTGAGGGTTTGGTGTTCAAGCTAGATTTCGAAAAGGCCTATGATAGAGTTAGTTGGGATTTTCTTGACAAGGTGTTACAGAGGAAAGAGTTTGGGGTTGGGGGGTGCTTCTCCAAGGCTTTCTTCACTGTTTTGGTGAATGGTGCCCCCAGGGAGTGGTTTTCTTGCTGCCGAGGCTTACGAAAAAGGGATCCCTTATCCCCTTTTCTGTTCTCTTTGGTGGTAGATTTGCTTAGTAGGCTTTTGGATCAGGCAGTGGATAGAGGGTTGGTGTTTGGTTTTCATTTAGCTCGAGAGAGATTGCGTGTTTCACATTTGCAGTTTGCTGATGACACTATTCTATTCCCAAAGGCGGATTTGCCTAGCTTCAAGCATGTGGTTACGATTTTGCAAGTGTTCGAGGTGGCTTCGGGGATGCGTGTGAACCTTGGCAAATGTAGCTTGGGTGGGGTTGACGTGTGCTCAGAGGTGTTGGGGACCTTTGCCATGTTGGCTGGTTGTCAAATCCAGAGTTGGCCAATGACATACTTGGGTGTCCCGCTTGGAGGCAATCCGCGCTCGGTCTCTTTTTGGGACCCGGTGATGAAGCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_147888.p1 GENE.S_Transcript_147888~~S_Transcript_147888.p1 ORF type:internal len:206 (+),score=38.58,RVT_1|PF00078.23|3.7e-20 S_Transcript_147888:3-617(+)
VDDARRSDFEGLVFKLDFEKAYDRVSWDFLDKVLQRKEFGVGGCFSKAFFTVLVNGAPREWFSCCRGLRKRDPLSPFLFSLVVDLLSRLLDQAVDRGLVFGFHLARERLRVSHLQFADDTILFPKADLPSFKHVVTILQVFEVASGMRVNLGKCSLGGVDVCSEVLGTFAMLAGCQIQSWPMTYLGVPLGGNPRSVSFWDPVMKR

Click here to download the sequence:
Link to NCBI Protein BLAST