Transcript Information: S_Transcript_14789.p1


Annotated TAIR IDAT4G39850.3
Annotated Gene Nameperoxisomal ABC transporter 1
Annotated Gene Symbol(s)PXA1
Annotation TypeOrtholog
Chromosome Positionchr4:18489220-18496762 | Forward length=1352
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.616161791645
Replicate 223.11557827084
Replicate 322.594264849307
Condition 2: 8 Hour
Replicate 133.55873144304
Replicate 232.350992742509
Replicate 331.61998140573
Condition 3: 24 Hour
Replicate 124.586824260679
Replicate 220.641936269744
Replicate 322.474830024891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14789.p1 GENE.S_Transcript_14789~~S_Transcript_14789.p1 ORF type:complete len:964 (+),score=175.05,ABC_membrane_2|PF06472.11|6.2e-83,ABC_tran|PF00005.23|2.6e-19,ABC_tran|PF00005.23|2.6e-15,AAA_21|PF13304.2|0.00013,AAA_21|PF13304.2|4.2e+03,AAA_21|PF13304.2|0.0012,AAA_21|PF13304.2|1.4e+03,AAA_29|PF13555.2|0.00064,AAA_29|PF13555.2|0.019,AAA_23|PF13476.2|0.0027,AAA_23|PF13476.2|0.093,AAA_16|PF13191.2|0.06,AAA_16|PF13191.2|0.021,SMC_N|PF02463.15|0.1,SMC_N|PF02463.15|6.2e+02,SMC_N|PF02463.15|0.15 S_Transcript_14789:1700-4591(+)
ATGCTAAGCAATCTTAGATATCATACAAGTGTTATTATTTCACTTTTTCAGTCTCTGGGAACTCTTTCCATCAGCTCAAGACGACTCAATCGTCTCAGTGGTTATGCAGACCGCATCCATGAACTAATTGCTGTTTCACAAGAACTTGGTTTTCGTGATAACTCTTCACAGAGAAATGGCAACAAAGATTGTTTTAGTGAGGCCAAGTACATCGAATTTTCTGGTGTCAAGGTTGTTACTCCATCTAACAATGTGCTGGTGGAAGACCTGACACTCAAAGTTGAACCAGGATCTAACCTATTAATCACAGGTCCAAATGGTAGTGGCAAAAGCTCACTTTTCCGAGTGTTAGGAGGACTTTGGCCTCTAATCTCTGGACATATTGCAAAGCCTGGAGTTGGGTCTGATCTTAATAAAGAGATATTTTATGTGCCGCAAAGACCATATACAGCGGTTGGCACACTTCGGGATCAGTTGATTTATCCGCTCAGTGCAGATCAGGAAGTTGAGCCTCTGACACGTAGTGGAATGATAGAGTTGCTGAAAAATGTTGATCTTGAGTATCTTCTTGATCGCTATCCTCCTGACACAGAGGTGAATTGGGGTGAGGAACTCTCTCTTGGGGAGCAACAGCGCCTGGGAATGGCAAGATTGTTCTATCACAAGCCTAAGTTTGCTATTCTTGATGAGTGCACAAGTGCAGTGACTACTGATATGGAAGATCGTTTTTGTGCTAAGGTCCGGGCTATGGGAACTTCATGTATCACCATATCACATCGTCCTGCATTAGTTGCATTTCATGATGTTGTACTGTCCTTGGATGGGGAAGGAGGATGGAATGTCCACTACAAAAGGGAAGATTCTCCTGTAGAAGATGAGAATCCAATGAATGCGGGCAAACCTTTAGAGTCTCACCGCCGAAATGATGCAATGACTGTACAGCGAGCTTTTGCTAAGGTTAAGAGTAAGAAGGGCTCTACCTTCTCCAGATCAAACTCAGAATCATATATCATGGATATTGTAGGGGCATCTCCTTCTCTAGATCGAGCTACAGCTTTGCCCCATGTTCCACAACTACAAATTTCTCCCAGGATGTTGCCTTTGCGAGTTGCAAATATGTTCAGGATATTGGTACCCACTGTGTTTGATAAGCAGGGAGCACAGTTGCTTGCCGTTGCCTTTTTGGTGGTCTCAAGAACATGGGTTTCCGACCGTATCGCCTCTTTAAATGGAACAACTGTGAAGTATGTTTTGGAGCAGGATAAGGCATCCTTTATCCGACTGATTGGGGTCAGCGTTCTCCAAAGTGGCGCTTCTTCATTTATTGCTCCTTCGATAAGGCACCTAACAGCTAGGTTGGCGCTGGGTTGGAGGGTTCGATTGACTCAACATATACTCAAGAACTACTTAAGGAACAATGCATTTTATAAGGTATTTCACATGTCGAGCAAAAGCATTGATGCAGATCAGAGAATTACCCAGGATCTTGAAAAGCTAACCACAGATTTATCGGGGCTTGTCACTGGAATGGTGAAGCCAACTGTGGACATTCTCTGGTTCACATGGAGAATGAAGCTGTTAACTGGTAGAAGAGGTGTTATTATCTTATATGCATATATGTTGCTTGGTTTGGGCTTTCTGAGGAGTGTGGCTCCTGATTTTGGTGATCTCACAAGCCAAGAACAACAGCTTGAAGGGACCTTCAGGTTCATGCATGAAAGATTGCGTACGCATGCAGAATCTGTTGCTTTCTTTGGAGGGGGTGCACGGGAAAAAGCAATGATTGAATCAAAATTTGAGAAGCTTCTCAGTCACTCTTTGCTACTGATGAGAAGGAAATGGCTATATGGCATACTTGATGATTTCATCACAAAGCAACTCCCACACAATGTCACCTGGGGACTGAGCTTATTGTATGCCTTGGAACATAAGGGAGATCGGTCTCTGACTTCCACACAAGGTGATCTAGCTCATGCACTGCGATTCTTGGCATCAGTTGTTTCTCAAAGCTTCTTGGCCTTTGGTGACATTCTTGAGCTACACAGGAAGTTTCTTGAGCTTTCTGGTGGTATCAATCGAATTTTTGAGCTGGAAGAGTTCTTAGATGCTGCTCAATCTGGTCACATGGCTCGTCCCTCACTGGGATATGAGGGCAACAGTTCTCACTCTAAAGACATGATAGCATTTTCTGATGTTGATATTATAACCCCATCCCAGAAATTATTAGCTAGGCGCTTGACATGTGATATCGTACAAGGAAAAAGCCTTCTTGTTACTGGACCAAACGGTAGTGGAAAAAGTTCAGTTTTCAGAGTTCTTCGTGGTCTGTGGCCTATTGTTAGTGGAAGACTCATCAAACCAAGCCAACTTTATGATGATGGGATTGAATCAGAATGTGGTATATTTGTTGTTCCACAACAACCGTATACGTGCCTTGGAACCCTTAGGGATCAGATTATATATCCTCTCTCTCATGAGGAAGCAGAGATAAGGGCAGTACACATGCATAGAGGTCAGCAGACTGTTCATGCCACAGATATACTAGATATGCAGTTGAAAACAATTCTGGAGAATGTTAAACTGATTTATTTATTGGAGAGAGAAGGTGGATTGGGTGCTACTCTAAACTGGGAAGATGTTCTCTCTCTTGGAGAGCAGCAGAGATTAGGAATGGCACGCCTGTTCTTCCACAAGCCTAAATTTGCTATCCTTGATGAGTGCACCAATGCAACGAGTGTTGATGTTGAAGAGCACTTGTATACGCTTGCAACCAACCTAGGAATTACAGTTATTACTTCCTCACAGCGCCCTGCATTAATTCCATTCCACAGATTGGAATTACGATTGATTGATGGGGAGGGCAACTGGGAGCTTCGTAAAATTAGGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14789.p1 GENE.S_Transcript_14789~~S_Transcript_14789.p1 ORF type:complete len:964 (+),score=175.05,ABC_membrane_2|PF06472.11|6.2e-83,ABC_tran|PF00005.23|2.6e-19,ABC_tran|PF00005.23|2.6e-15,AAA_21|PF13304.2|0.00013,AAA_21|PF13304.2|4.2e+03,AAA_21|PF13304.2|0.0012,AAA_21|PF13304.2|1.4e+03,AAA_29|PF13555.2|0.00064,AAA_29|PF13555.2|0.019,AAA_23|PF13476.2|0.0027,AAA_23|PF13476.2|0.093,AAA_16|PF13191.2|0.06,AAA_16|PF13191.2|0.021,SMC_N|PF02463.15|0.1,SMC_N|PF02463.15|6.2e+02,SMC_N|PF02463.15|0.15 S_Transcript_14789:1700-4591(+)
MLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELIAVSQELGFRDNSSQRNGNKDCFSEAKYIEFSGVKVVTPSNNVLVEDLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLISGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLSADQEVEPLTRSGMIELLKNVDLEYLLDRYPPDTEVNWGEELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEDRFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWNVHYKREDSPVEDENPMNAGKPLESHRRNDAMTVQRAFAKVKSKKGSTFSRSNSESYIMDIVGASPSLDRATALPHVPQLQISPRMLPLRVANMFRILVPTVFDKQGAQLLAVAFLVVSRTWVSDRIASLNGTTVKYVLEQDKASFIRLIGVSVLQSGASSFIAPSIRHLTARLALGWRVRLTQHILKNYLRNNAFYKVFHMSSKSIDADQRITQDLEKLTTDLSGLVTGMVKPTVDILWFTWRMKLLTGRRGVIILYAYMLLGLGFLRSVAPDFGDLTSQEQQLEGTFRFMHERLRTHAESVAFFGGGAREKAMIESKFEKLLSHSLLLMRRKWLYGILDDFITKQLPHNVTWGLSLLYALEHKGDRSLTSTQGDLAHALRFLASVVSQSFLAFGDILELHRKFLELSGGINRIFELEEFLDAAQSGHMARPSLGYEGNSSHSKDMIAFSDVDIITPSQKLLARRLTCDIVQGKSLLVTGPNGSGKSSVFRVLRGLWPIVSGRLIKPSQLYDDGIESECGIFVVPQQPYTCLGTLRDQIIYPLSHEEAEIRAVHMHRGQQTVHATDILDMQLKTILENVKLIYLLEREGGLGATLNWEDVLSLGEQQRLGMARLFFHKPKFAILDECTNATSVDVEEHLYTLATNLGITVITSSQRPALIPFHRLELRLIDGEGNWELRKIRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST