Transcript Information: S_Transcript_147952.p1


Annotated TAIR IDAT5G25190.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8707007-8707655 | Reverse length=181
E-Value5.6E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93378951702388
Replicate 20.87089958779664
Replicate 30.88978112684038
Condition 2: 8 Hour
Replicate 12.8059724101491
Replicate 22.3549314357607
Replicate 32.2437734321033
Condition 3: 24 Hour
Replicate 10.57486535501564
Replicate 21.1928321882288
Replicate 31.880591030206


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_147952.p1 GENE.S_Transcript_147952~~S_Transcript_147952.p1 ORF type:complete len:228 (+),score=26.93,AP2|PF00847.16|1.3e-10 S_Transcript_147952:105-686(+)
ATGGCTAGACCACAACAACGGTATCGTGGTGTTAGGCAAAGGCATTGGGGCTCTTGGGTCTCAGAGATTCGTCATCCCATTTTAAAAACGAGAATTTGGTTGGGCACATTCGAAACGGCAGAAGACGCAGCCCGGGCCTATGATGAGGCGGCCTGGCTCATGTGCGGGCCTAGGGCCCGGACCAATTTCCCTTACAACCCAAATGCCCCTCAAACCTCCTCCTCTAAGCTTCTTTCAGCCACTCTCACTGCCAAGCTTCATCGCTGTTATATGGCCTCATTGCAGGTCACTAAGAATTCAGCTACGCAAGCTCAACAAAGGGGGCCCAGCCCACAATTCTCGGGCTCGGGCAACAACGTTGTTGCGAAATTAGGGGGCATGAGCAATTGGCCTATTATCGAGCACGTGCCAACAATGACAAGCCCAACGCCCCCTAAACCCGAGCCCAATTGGGTAATGAAGGTCGAGAATGCCCAACTTGAGCAGCAGCAACAACAACAATTTGAGCCACTTGAGGAGGATCACATTGAGCAAATGATTGAGGAGTTGCTTGGTTATGGTTCGATTGAAATTGCTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_147952.p1 GENE.S_Transcript_147952~~S_Transcript_147952.p1 ORF type:complete len:228 (+),score=26.93,AP2|PF00847.16|1.3e-10 S_Transcript_147952:105-686(+)
MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAAWLMCGPRARTNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSATQAQQRGPSPQFSGSGNNVVAKLGGMSNWPIIEHVPTMTSPTPPKPEPNWVMKVENAQLEQQQQQQFEPLEEDHIEQMIEELLGYGSIEIAV*

Click here to download the sequence:
Link to NCBI Protein BLAST