Transcript Information: S_Transcript_147961.p1


Annotated TAIR IDAT1G62720.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23227574-23229031 | Forward length=485
E-Value6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.416279048255
Replicate 30.69595230504153
Condition 2: 8 Hour
Replicate 10.20118292752012
Replicate 22.5326621101577
Replicate 32.6142077251392
Condition 3: 24 Hour
Replicate 10.61825141954512
Replicate 21.2828572590385
Replicate 32.1414943362834


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_147961.p1 GENE.S_Transcript_147961~~S_Transcript_147961.p1 ORF type:complete len:106 (+),score=11.84,PPR_2|PF13041.2|5.9e-19,PPR_2|PF13041.2|2.5e-14,PPR_1|PF12854.3|4.8e-12,PPR_1|PF12854.3|4.7e-13,PPR_1|PF12854.3|0.19,PPR|PF01535.16|2e-08,PPR|PF01535.16|1.1e-09,PPR|PF01535.16|4.9e+03,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|0.00046,PPR_3|PF13812.2|8.2e+03 S_Transcript_147961:524-841(+)
ATGACTATGAGGGATGTAAAGCCTAACGTTGTTACCTACAATTCCCTTTTGGATTTATACTGTTTGCTAGGCCAAGTGGATCAAGCATTTGAGTTTATGGATCTGATGACTAGAAATGGGTGCCAACCTGATGTTGTGATGCTCAACACCATGATCAATGGGTATTGCAAGAGTAGATTCCTTGACGAAGCTTTCAGGCTTTTCAAGGAAATCTCTTCTAAGGGATTGAGCCCCCATGTAAATACATATAACACTCTTTGGGTAATAGGATCCAATGTGAGCTTCAACTCTTCAAAGAGATGCAAGCTCAGGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_147961.p1 GENE.S_Transcript_147961~~S_Transcript_147961.p1 ORF type:complete len:106 (+),score=11.84,PPR_2|PF13041.2|5.9e-19,PPR_2|PF13041.2|2.5e-14,PPR_1|PF12854.3|4.8e-12,PPR_1|PF12854.3|4.7e-13,PPR_1|PF12854.3|0.19,PPR|PF01535.16|2e-08,PPR|PF01535.16|1.1e-09,PPR|PF01535.16|4.9e+03,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|0.00046,PPR_3|PF13812.2|8.2e+03 S_Transcript_147961:524-841(+)
MTMRDVKPNVVTYNSLLDLYCLLGQVDQAFEFMDLMTRNGCQPDVVMLNTMINGYCKSRFLDEAFRLFKEISSKGLSPHVNTYNTLWVIGSNVSFNSSKRCKLRA*

Click here to download the sequence:
Link to NCBI Protein BLAST