Transcript Information: S_Transcript_147970.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.0309714746502
Replicate 30.51708605841871
Condition 2: 8 Hour
Replicate 10
Replicate 20.31362404635131
Replicate 30.69724735156481
Condition 3: 24 Hour
Replicate 10.30623668444758
Replicate 20
Replicate 30.23572004116931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_147970.p1 GENE.S_Transcript_147970~~S_Transcript_147970.p1 ORF type:5prime_partial len:214 (-),score=48.84,PPR_2|PF13041.2|3.9e-20,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|2.2e-16,PPR_2|PF13041.2|6e-16,PPR_2|PF13041.2|2.9e-06,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|6e-13,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|4.4e-12,PPR_1|PF12854.3|0.00064,PPR|PF01535.16|1e-07,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|3.1e-10,PPR|PF01535.16|0.012,PPR_3|PF13812.2|6e-07,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|0.023,MRP-S27|PF10037.5|0.27,MRP-S27|PF10037.5|0.00018,MRP-S27|PF10037.5|6.7e+02 S_Transcript_147970:28-669(-)
TTTTCTAAAGGATTGAGCCCCAATGTGAATACTTATAATACTCTTATAGACGGCTTGTGCAAGGGTACTAGGCTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAAATGCTGTCACCTTTAGTACTTTGGTGGATGGCCTATGTAAGGATGGACAACTTGATGAGGCTGTAACAATGTCTAAGGAGATGGAGAGGAATGGAGTGGTAAAGGATCTTGTGAGCTACAATGTGTTAATTGATGGTATGTGTGAAAAGGGGAGATGGAAAGAGGCATCGGAAGTCTTCTCCAAGCTGATGGCCAAGGGATTGCAGCTAAATTGTATAACGTACACTGCAATGATAAAAGGACTTTGCAAGAAGGGGCTCTTAGATCAAGCTGATGAATTATTGAAGAAGATGGAGGAGCATGGCTGTTTTCCGAATGATCGTACCTACAATACCATTATTACTGGGTTCCTTTCCAACCACCAAATCACAAGAGGCCTGCAGCTTATTGAGATTATGACTAGCAGAGGTTTTGAAGCAGATGCTGAAACTTTGTCTGTATTCCTTGACTTGCTTTCAGATGACCGTGTAGACAATTCAGTCAAGAAGCAGCTTCATAAATTTTTGAAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_147970.p1 GENE.S_Transcript_147970~~S_Transcript_147970.p1 ORF type:5prime_partial len:214 (-),score=48.84,PPR_2|PF13041.2|3.9e-20,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|2.2e-16,PPR_2|PF13041.2|6e-16,PPR_2|PF13041.2|2.9e-06,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|6e-13,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|4.4e-12,PPR_1|PF12854.3|0.00064,PPR|PF01535.16|1e-07,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|3.1e-10,PPR|PF01535.16|0.012,PPR_3|PF13812.2|6e-07,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|0.023,MRP-S27|PF10037.5|0.27,MRP-S27|PF10037.5|0.00018,MRP-S27|PF10037.5|6.7e+02 S_Transcript_147970:28-669(-)
FSKGLSPNVNTYNTLIDGLCKGTRLQLALQLFKEMQAQGITPNAVTFSTLVDGLCKDGQLDEAVTMSKEMERNGVVKDLVSYNVLIDGMCEKGRWKEASEVFSKLMAKGLQLNCITYTAMIKGLCKKGLLDQADELLKKMEEHGCFPNDRTYNTIITGFLSNHQITRGLQLIEIMTSRGFEADAETLSVFLDLLSDDRVDNSVKKQLHKFLKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST