Transcript Information: S_Transcript_148143.p1


Annotated TAIR IDAT5G18820.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)EMB3007
Annotation TypeHomolog
Chromosome Positionchr5:6271549-6274153 | Forward length=575
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28463102925327
Replicate 21.8877253097339
Replicate 31.775236628368
Condition 2: 8 Hour
Replicate 11.2544347245372
Replicate 21.5552622049008
Replicate 32.3937582871904
Condition 3: 24 Hour
Replicate 11.1681755877323
Replicate 20.96957482679561
Replicate 30.80926345684864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148143.p1 GENE.S_Transcript_148143~~S_Transcript_148143.p1 ORF type:5prime_partial len:187 (+),score=14.83,Cpn60_TCP1|PF00118.20|1e-08 S_Transcript_148143:1-561(+)
AAAGAAAGAAAAAAAAAAAAACTCTTTGCTCTTACTGCTCTTCATTTGAGTCTGCAGTCTCTCCCCACTTACCTACGTAAAACCTCGACTCTCACCATTCTTCCTCCATCTTCTCGCCGGCAGTTTCCGGCCTTTGGCGGGTTATCTCAGTCCCGCTACACGACCGGGCGACTCTCACATATCTTCAAGTTCTTCAACCATAACTTCAGAATGAGTCTGAATTTCTGTACCACTTACTTGGCTCCAGGATTGCCGACCAAAAACTTGCGAATATCGAAGAGTTTGCTTGTTGAAGCTGGCCCAAAGAGCATTACTTTTGATAATAATTGTAGAAAATCTTTACAAACTGGTATTGACAAGCTTGCAAATGCTGTCTCTGTGACGTTGGGACCGAAAGGGCGGAATGTAATTCTCTCAGACTCAATTCTCTCAGACTCTAAAACCTTGAAAGTAATAAATGATGGTGTCACCATCGCGAAAGCCATAGAACTTGCGGATGCAGTTGAAAACACAGGAGCAATGCTTATCCAAGAGTGTGCATACAGGTTGCGTCTAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148143.p1 GENE.S_Transcript_148143~~S_Transcript_148143.p1 ORF type:5prime_partial len:187 (+),score=14.83,Cpn60_TCP1|PF00118.20|1e-08 S_Transcript_148143:1-561(+)
KERKKKKLFALTALHLSLQSLPTYLRKTSTLTILPPSSRRQFPAFGGLSQSRYTTGRLSHIFKFFNHNFRMSLNFCTTYLAPGLPTKNLRISKSLLVEAGPKSITFDNNCRKSLQTGIDKLANAVSVTLGPKGRNVILSDSILSDSKTLKVINDGVTIAKAIELADAVENTGAMLIQECAYRLRLR*

Click here to download the sequence:
Link to NCBI Protein BLAST