Transcript Information: S_Transcript_148144.p1


Annotated TAIR IDAT5G18820.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)EMB3007
Annotation TypeOrtholog
Chromosome Positionchr5:6271549-6274153 | Forward length=575
E-Value2.9E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6177810362414
Replicate 23.3245299333242
Replicate 34.9685909996915
Condition 2: 8 Hour
Replicate 13.7002960367628
Replicate 23.3711004799588
Replicate 35.1586297856804
Condition 3: 24 Hour
Replicate 12.5934564874678
Replicate 23.6220703432519
Replicate 32.9943979659042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148144.p1 GENE.S_Transcript_148144~~S_Transcript_148144.p1 ORF type:5prime_partial len:219 (+),score=43.27,Cpn60_TCP1|PF00118.20|3.7e-35 S_Transcript_148144:1-657(+)
CCAAAGAGCATTACTTTTGATAATAATTGTAGAAAATCTTTACAAACTGGTATTGACAAGCTTGCAAATGCTGTCTCTGTGACGTTGGGACCGAAAGGGCGGAATGTAATTCTCTCAGACTCAATTCTCTCAGACTCTAAAACCTTGAAAGTAATAAATGATGGTGTCACCATCGCGAAAGCCATAGAACTTGCGGATGCAGTTGAAAACACAGGAGCAATGCTTATCCAAGAGGTTGCGTCTAAGGTGAACAATGCAGCTGGTGATGGTACGACCACTGCAATTATTTTAGCTCGAGAAATGATCAACATTGGGTTGTTAGCTGTTACCTTTGGAGCTAATCCGGTTGGTTTAAGAAGAGGTATGATGAAGACTACAAATGAACTAATCAAAACTTTGAAGAATCATAGTATTCCTGTTAAGGGAAGAGATGATATAAAAGCCGTGGCTTCCATCTCTGCTGGTAATGACGACTTTGTCGGGAGTATAATTGCTGAAGCCATTGATAAGATTGGGGCTGACGGTGTGATATCTATTGAGTCATCCTCAACTTCTGAGACTTCCATTATTGTAGAGGAAGGAATGAAGGTTCTGCTTCACTCATTCTTGTCCAAGTTGCCTGCTCTTCAGATGATGTCTCCCCCCGTGCTTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148144.p1 GENE.S_Transcript_148144~~S_Transcript_148144.p1 ORF type:5prime_partial len:219 (+),score=43.27,Cpn60_TCP1|PF00118.20|3.7e-35 S_Transcript_148144:1-657(+)
PKSITFDNNCRKSLQTGIDKLANAVSVTLGPKGRNVILSDSILSDSKTLKVINDGVTIAKAIELADAVENTGAMLIQEVASKVNNAAGDGTTTAIILAREMINIGLLAVTFGANPVGLRRGMMKTTNELIKTLKNHSIPVKGRDDIKAVASISAGNDDFVGSIIAEAIDKIGADGVISIESSSTSETSIIVEEGMKVLLHSFLSKLPALQMMSPPVLE*

Click here to download the sequence:
Link to NCBI Protein BLAST