Transcript Information: S_Transcript_148147.p1


Annotated TAIR IDAT5G18820.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)EMB3007
Annotation TypeHomolog
Chromosome Positionchr5:6271549-6274153 | Forward length=575
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2587230313937
Replicate 20.29814580483128
Replicate 30.12461308164595
Condition 2: 8 Hour
Replicate 11.0086333258103
Replicate 20.75580569728806
Replicate 30.57610398932382
Condition 3: 24 Hour
Replicate 10.59040225650254
Replicate 20.76566931001174
Replicate 31.5337729705814


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148147.p1 GENE.S_Transcript_148147~~S_Transcript_148147.p1 ORF type:3prime_partial len:148 (+),score=20.28,Cpn60_TCP1|PF00118.20|3.1e-21 S_Transcript_148147:274-714(+)
ATGAGTCTGAATTTCTGTACCACTTACTTGGCTCCAGGATTGCCGACGAAAAACTTGCGAATATCAAATAGTATGCTTGTTAAAGCTGGTCCAAAGAGCATTACTTTTGATAATAATTGTAGAAAATCTTTACAAACTGGTATTGACAAGCTTGCAAATGCTGTCTCTGTGACGTTGGGACCGAAAGGGCGGAATGTAATTCTCTCAGACTCAATTCTCTCAGACTCTAAAACCTTGAAAGTAATAAATGATGGTGTCACCATCGCGAAAGCCATAGAACTTGCGGATGCAGTTGAAAACACAGGAGCAATGCTTATCCAAGAGGTTGCGTCTAAGGTGAACAATGCAGCTGGTGATGGTACGACCACTGCAATTATTTTAGCTCGAGAAATGATCAACATTGGGTTGTTAGCTGTTACCTTTGGAGCTAATCCGGTTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148147.p1 GENE.S_Transcript_148147~~S_Transcript_148147.p1 ORF type:3prime_partial len:148 (+),score=20.28,Cpn60_TCP1|PF00118.20|3.1e-21 S_Transcript_148147:274-714(+)
MSLNFCTTYLAPGLPTKNLRISNSMLVKAGPKSITFDNNCRKSLQTGIDKLANAVSVTLGPKGRNVILSDSILSDSKTLKVINDGVTIAKAIELADAVENTGAMLIQEVASKVNNAAGDGTTTAIILAREMINIGLLAVTFGANPVG

Click here to download the sequence:
Link to NCBI Protein BLAST