Transcript Information: S_Transcript_148248.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.3128929879682
Replicate 30.14906187136351
Condition 3: 24 Hour
Replicate 10.61104569204459
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148248.p2 GENE.S_Transcript_148248~~S_Transcript_148248.p2 ORF type:complete len:143 (+),score=22.99,RVT_1|PF00078.23|5.4e-21 S_Transcript_148248:848-1276(+)
ATGGTAGGCAAATTTTGGACGTTGCTGGCTAATGAGTTTGTGGATGATGCTCGGAGATCAGGTTTTGAGGGGGTGGTCTTTAAACTTGATTTTGAGAAAGCCTATGATAGGGTTAGTTGGTCCTTTCTAGATAGGGTGCTTCAGCGGAAGGGGTTTGGGGAGAGGTGGCGTCATTGGGTGAGGGGATGCTTTTCGAATGCTGCTTTCTCTGTTTTGGTGAATGGTGCCCCGCGGGAGTGGTTCTCCTCCTCCCGTGGGTTACGCCAAGGAGATCCGCTGTCCCCCTTTCTTTTTACTTTGGTGGTGGACGTGCTTAGTCGGATGTTGGAAAGGGCGGTGGATAAGGGAGTGGTGGAGGGTTTTGCTGTGGGTCGAGGAGGGTTGCAGGTATCTCATCTAACTTTTGCAAGCGGATTTGCCGAGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148248.p2 GENE.S_Transcript_148248~~S_Transcript_148248.p2 ORF type:complete len:143 (+),score=22.99,RVT_1|PF00078.23|5.4e-21 S_Transcript_148248:848-1276(+)
MVGKFWTLLANEFVDDARRSGFEGVVFKLDFEKAYDRVSWSFLDRVLQRKGFGERWRHWVRGCFSNAAFSVLVNGAPREWFSSSRGLRQGDPLSPFLFTLVVDVLSRMLERAVDKGVVEGFAVGRGGLQVSHLTFASGFAEI*

Click here to download the sequence:
Link to NCBI Protein BLAST