Transcript Information: S_Transcript_148310.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38945855466118
Replicate 20
Replicate 30.2698936987844
Condition 2: 8 Hour
Replicate 10.31207888268975
Replicate 20.32739290692283
Replicate 30.51989872207272
Condition 3: 24 Hour
Replicate 10.10656040727119
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148310.p1 GENE.S_Transcript_148310~~S_Transcript_148310.p1 ORF type:complete len:205 (-),score=12.47,RVT_2|PF07727.10|3e-10 S_Transcript_148310:1543-2157(-)
ATGAGATTCGTGCTCTCTACACCCATGGCATGTGGGATCCGATGCCCCTCAATTCCGGTTCTATACCTACATTGGTTGACTCTGTTTCAAACTCTTAACTTTACATCACTGCCTATGCATGGTATCTCTGTAACGGCACCATATGATTCTTCCACATCTAATCACTTTACACCTCATAAAACCACACCAAACATATCATCCTCATCAAATTCTAATCCCATCGCTTCTCTGCCGCTCACTATTGATCATTTTGCACCACCACCACAAATCAATCCACCCTCTTCCATTAGTATTACACAATCTAAGCTTCAGATGCACAAATCAAACTCAAAGCAAGCGAACTCCACTACTACTCAACCCCAACCCACTGAACCCATTAATGTAGCTCAAGCTCTTCAAGACCCACTTTGGCGTCAAGCCATGTTGGATGAGCTTCGTTCTCTCTACACCCTTGGCATGTGGGATCCGGTGCCCCTCAATTCCGGTCATATTCTCACCAAGTGCAAGTGGGTGTTTCGTATCAAATATAAACCTGATGCTACCATCGAACGTTATCAAGCACGACTTGTTGCCAAAGGATTTTCAACAAGGCCTAGAGTCCTATTTCTTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148310.p1 GENE.S_Transcript_148310~~S_Transcript_148310.p1 ORF type:complete len:205 (-),score=12.47,RVT_2|PF07727.10|3e-10 S_Transcript_148310:1543-2157(-)
MRFVLSTPMACGIRCPSIPVLYLHWLTLFQTLNFTSLPMHGISVTAPYDSSTSNHFTPHKTTPNISSSSNSNPIASLPLTIDHFAPPPQINPPSSISITQSKLQMHKSNSKQANSTTTQPQPTEPINVAQALQDPLWRQAMLDELRSLYTLGMWDPVPLNSGHILTKCKWVFRIKYKPDATIERYQARLVAKGFSTRPRVLFLL*

Click here to download the sequence:
Link to NCBI Protein BLAST