Transcript Information: S_Transcript_148372.p1


Annotated TAIR IDAT1G19880.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6900648-6903818 | Reverse length=538
E-Value3E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.233978629554
Replicate 227.745629292026
Replicate 329.969446135851
Condition 2: 8 Hour
Replicate 124.193009090838
Replicate 224.998846017876
Replicate 323.051797315236
Condition 3: 24 Hour
Replicate 125.113341437104
Replicate 224.938777511094
Replicate 331.432017459406


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148372.p1 GENE.S_Transcript_148372~~S_Transcript_148372.p1 ORF type:complete len:528 (-),score=139.90,RCC1|PF00415.14|59,RCC1|PF00415.14|2.8e-14,RCC1|PF00415.14|1.4e-08,RCC1|PF00415.14|8.6e-09,RCC1|PF00415.14|1e-08,RCC1|PF00415.14|7.7e+02,RCC1|PF00415.14|1.2e-07,RCC1_2|PF13540.2|3.4e-05,RCC1_2|PF13540.2|0.00045,RCC1_2|PF13540.2|59,RCC1_2|PF13540.2|3.2e-06,RCC1_2|PF13540.2|1.9e+02,RCC1_2|PF13540.2|9.3e+03,RCC1_2|PF13540.2|4.8 S_Transcript_148372:434-2017(-)
ATGGCTGAAGTAGAAGCTGAGAAGAAATGTGAGGAAGAAAAGGGAAAGAAAGGAGGGGAGCTGGTGTTTTGTGGTTCAACTGCTTGGGATACTGTTGGTAGGAAGAAAACTGGTATTGAAGGTAACTTGTACTCTCCTACTAGGCTTAGGCCTCTTGTTGGTATCGACATTCGCTCCGTTGCTTCCGGATGTGTTTCATGTCATTGCGTCGCATTGGATGTCGATGGACGGTGCTATACATGGGGACGAAATGAGAGAGGGCAGTTGGGTCATGGAGATACGCTGCAGCGTGATAGGCCCACAGTTGTGTCTGAGCTCTCCAAGCATAAAATAGTGAGAGCAGGTGCTGGTCGAAGTCATACCGTAGTGGTGACTGGTGATGGACAATCCTTTGCCTTTGGATGGAACAAACATGGGCAGCTGGGTACTGGTTCACTAAGAAATGAAGTTGAGTCTTCTCCCGTTCGATGTCTTGTATCCGAAGTCAAAACAGTTGCTTGTGGTGGTGAATTTACTGTGTGGTTGTCTTCTGCTCAAGGAGCTTCTATCCTAACGGCTGGTCTCCCACAATATGGTCAGCTTGGACATGGGACTGACAATGAGTACAATTCAAAGGATGGTTCTGTGAGGCTTGCTTATGAGCCTCAAGCACGACCTAAAGCTATAGCCTCTCTTTCCGGGGAAACCATTGTTAAAGTTGCATGTGGAACAAATCACACAGTTGCTGTGGATTCTAATGGCTACGTTTACACCTGGGGCTTTGGTGGTTATGGAAGACTGGGGCATAGGGAGCAGAAGGATGAGTGGGTTCCCCGACGTGTTGATGTATTTTCGAGGCATAATATTTTGCCTCCTGATGCAGTGGTGTCTGCAGGAGCTGTCAATTCTGCGTGTACTGCTGCTGGTGGACAGTTGTACATGTGGGGCAAACTAAAGAACACAGGTGATGATTGGATGTATCCAAAACCACTCATGGATTTGAGTGGATGGAATTTGCGGTGTATGGATTCTGGCCATATGTTCCATTTTGTTGGTGCTGACACATCATGTATAAGTTGGGGTCATGCGCAAAATGGAGAATTGGGTTATGGTCCCAATGCGCAAAAATCTTCTGCGATGCCAAAGAAGGTGGATATCCTTGAGGGTATGCATGTCATCAGTGTTGCATGTGGATTTGCACATTCCATGGTGGTGGTGGATAGAACAAATGTCGGTGATCGTCTTGAACATCTCGACGTTTATGATGGGAAAGCGTCAGGAGTGGAAGGAACTGAGGTCATTGAGCCTGTGAGTTCAGCAAAAAAAGCCCCAAAGAGAAATTCTGCACGGAATTCCAAGAAAAGGAAGAAGGGGAAGGACTTTTCAGATTCTGAGGAGGAATCAGGTCAAGACAGTGATGCTGACGGTGACGATGAAAGTGAAGAGGAGGCTGCAAATGGGAAGATGGATAAGAGGCAGCGAGGTGGAAAAGCTGGAGGTAGAGGTCGAGGAAGGGGAGGCAAGAAAACACCAGTAGAGCCAAAAAGCAGTGGCCGAGGGCGAGGCCGCCCCAAAGGCTCGACTGGGAGAAAAACTCGTACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148372.p1 GENE.S_Transcript_148372~~S_Transcript_148372.p1 ORF type:complete len:528 (-),score=139.90,RCC1|PF00415.14|59,RCC1|PF00415.14|2.8e-14,RCC1|PF00415.14|1.4e-08,RCC1|PF00415.14|8.6e-09,RCC1|PF00415.14|1e-08,RCC1|PF00415.14|7.7e+02,RCC1|PF00415.14|1.2e-07,RCC1_2|PF13540.2|3.4e-05,RCC1_2|PF13540.2|0.00045,RCC1_2|PF13540.2|59,RCC1_2|PF13540.2|3.2e-06,RCC1_2|PF13540.2|1.9e+02,RCC1_2|PF13540.2|9.3e+03,RCC1_2|PF13540.2|4.8 S_Transcript_148372:434-2017(-)
MAEVEAEKKCEEEKGKKGGELVFCGSTAWDTVGRKKTGIEGNLYSPTRLRPLVGIDIRSVASGCVSCHCVALDVDGRCYTWGRNERGQLGHGDTLQRDRPTVVSELSKHKIVRAGAGRSHTVVVTGDGQSFAFGWNKHGQLGTGSLRNEVESSPVRCLVSEVKTVACGGEFTVWLSSAQGASILTAGLPQYGQLGHGTDNEYNSKDGSVRLAYEPQARPKAIASLSGETIVKVACGTNHTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFSRHNILPPDAVVSAGAVNSACTAAGGQLYMWGKLKNTGDDWMYPKPLMDLSGWNLRCMDSGHMFHFVGADTSCISWGHAQNGELGYGPNAQKSSAMPKKVDILEGMHVISVACGFAHSMVVVDRTNVGDRLEHLDVYDGKASGVEGTEVIEPVSSAKKAPKRNSARNSKKRKKGKDFSDSEEESGQDSDADGDDESEEEAANGKMDKRQRGGKAGGRGRGRGGKKTPVEPKSSGRGRGRPKGSTGRKTRT*

Click here to download the sequence:
Link to NCBI Protein BLAST