Transcript Information: S_Transcript_148374.p1


Annotated TAIR IDAT1G19880.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6900648-6903818 | Reverse length=538
E-Value6.1E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5925327053309
Replicate 211.939862584067
Replicate 312.421725185719
Condition 2: 8 Hour
Replicate 19.3455386978024
Replicate 29.8699332234088
Replicate 310.407149124785
Condition 3: 24 Hour
Replicate 111.050941059948
Replicate 211.065272710805
Replicate 38.6793505747017


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148374.p1 GENE.S_Transcript_148374~~S_Transcript_148374.p1 ORF type:complete len:340 (-),score=77.41,RCC1|PF00415.14|32,RCC1|PF00415.14|1.5e-14,RCC1|PF00415.14|7.7e-09,RCC1|PF00415.14|4.5e-09,RCC1|PF00415.14|1.9e-08,RCC1_2|PF13540.2|1.9e-05,RCC1_2|PF13540.2|0.00026,RCC1_2|PF13540.2|34,RCC1_2|PF13540.2|1.9e-06 S_Transcript_148374:5-1024(-)
ATGGCTGAAGTAGAAGCTGAGAAGAAATGTGAGGAAGAAAAGGGAAAGAAAGGAGGGGAGCTGGTGTTTTGTGGTTCAACTGCTTGGGATACTGTTGGTAGGAAGAAAACTGGTATTGAAGGTAACTTGTACTCTCCTACTAGGCTTAGGCCTCTTGTTGGTATCGACATTCGCTCCGTTGCTTCCGGATGTGTTTCATGTCATTGCGTCGCATTGGATGTCGATGGACGGTGCTATACATGGGGACGAAATGAGAGAGGGCAGTTGGGTCATGGAGATACGCTGCAGCGTGATAGGCCCACAGTTGTGTCTGAGCTCTCCAAGCATAAAATAGTGAGAGCAGGTGCTGGTCGAAGTCATACCGTAGTGGTGACTGGTGATGGACAATCCTTTGCCTTTGGATGGAACAAACATGGGCAGCTGGGTACTGGTTCACTAAGAAATGAAGTTGAGTCTTCTCCCGTTCGATGTCTTGTATCCGAAGTCAAAACAGTTGCTTGTGGTGGTGAATTTACTGTGTGGTTGTCTTCTGCTCAAGGAGCTTCTATCCTAACGGCTGGTCTCCCACAATATGGTCAGCTTGGACATGGGACTGACAATGAGTACAATTCAAAGGATGGTTCTGTGAGGCTTGCTTATGAGCCTCAAGCACGACCTAAAGCTATAGCCTCTCTTTCCGGGGAAACCATTGTTAAAGTTGCATGTGGAACAAATCACACAGTTGCTGTGGATTCTAATGGCTACGTTTACACCTGGGGCTTTGGTGGTTATGGAAGACTGGGGCATAGGGAGCAGAAGGATGAGTGGGTTCCCCGACGTGTTGATGTATTTTCGAGGCATAATATTTTGCCTCCTGATGCAGTATTGTCTGCAGGGGCTGTCAATTCTGTGTGCACTGCTGGTATGGACACCAGTTATCCTTTCTGTTTCAGACTTTCAGTTCAATTAAAAGAATATGTATATGTGAGTTCTTCTCATGCTTCTTTGTTTGCTTGTATCCTTTTATTTTGGAAAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148374.p1 GENE.S_Transcript_148374~~S_Transcript_148374.p1 ORF type:complete len:340 (-),score=77.41,RCC1|PF00415.14|32,RCC1|PF00415.14|1.5e-14,RCC1|PF00415.14|7.7e-09,RCC1|PF00415.14|4.5e-09,RCC1|PF00415.14|1.9e-08,RCC1_2|PF13540.2|1.9e-05,RCC1_2|PF13540.2|0.00026,RCC1_2|PF13540.2|34,RCC1_2|PF13540.2|1.9e-06 S_Transcript_148374:5-1024(-)
MAEVEAEKKCEEEKGKKGGELVFCGSTAWDTVGRKKTGIEGNLYSPTRLRPLVGIDIRSVASGCVSCHCVALDVDGRCYTWGRNERGQLGHGDTLQRDRPTVVSELSKHKIVRAGAGRSHTVVVTGDGQSFAFGWNKHGQLGTGSLRNEVESSPVRCLVSEVKTVACGGEFTVWLSSAQGASILTAGLPQYGQLGHGTDNEYNSKDGSVRLAYEPQARPKAIASLSGETIVKVACGTNHTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFSRHNILPPDAVLSAGAVNSVCTAGMDTSYPFCFRLSVQLKEYVYVSSSHASLFACILLFWKS*

Click here to download the sequence:
Link to NCBI Protein BLAST