Transcript Information: S_Transcript_148678.p1


Annotated TAIR IDAT2G45660.1
Annotated Gene NameAGAMOUS-like 20
Annotated Gene Symbol(s)AGL20, SOC1, ATSOC1
Annotation TypeHomolog
Chromosome Positionchr2:18807799-18810193 | Reverse length=214
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.976655356981
Replicate 23.2967386695137
Replicate 35.7236077500829
Condition 2: 8 Hour
Replicate 14.4121497207861
Replicate 24.3715106537397
Replicate 33.6751461387899
Condition 3: 24 Hour
Replicate 16.7794466005292
Replicate 25.2100716267465
Replicate 34.058719789329


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148678.p1 GENE.S_Transcript_148678~~S_Transcript_148678.p1 ORF type:5prime_partial len:87 (-),score=14.93,K-box|PF01486.13|1.2e-20 S_Transcript_148678:169-429(-)
GAAGAAATTGAAGCTTCAAAACGGAGACTTCTTGGAGAGAATTTAGCATCTTGCAGTTTAGAAGAGCTGCAACAGCTGGAGCAACAGCTGGAGAGGAGTGTTAGCAAAATTAGAGCAAGAAAGAACCAAGTCTTCAATGAACAAATACGGCAATTGAAAGAAAAGGTATATGTATCGTGCAAACTAATTGTGTTTGACTTGTTAATTTTAGTTCTGAAACTCTTCAAAGCAATTTATGGAAAACTACTAAATTACTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148678.p1 GENE.S_Transcript_148678~~S_Transcript_148678.p1 ORF type:5prime_partial len:87 (-),score=14.93,K-box|PF01486.13|1.2e-20 S_Transcript_148678:169-429(-)
EEIEASKRRLLGENLASCSLEELQQLEQQLERSVSKIRARKNQVFNEQIRQLKEKVYVSCKLIVFDLLILVLKLFKAIYGKLLNYS*

Click here to download the sequence:
Link to NCBI Protein BLAST