Transcript Information: S_Transcript_148679.p1


Annotated TAIR IDAT2G45660.1
Annotated Gene NameAGAMOUS-like 20
Annotated Gene Symbol(s)AGL20, SOC1, ATSOC1
Annotation TypeHomolog
Chromosome Positionchr2:18807799-18810193 | Reverse length=214
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.56995777441
Replicate 232.215577672477
Replicate 332.478800713598
Condition 2: 8 Hour
Replicate 131.70500507326
Replicate 225.93550594517
Replicate 324.89992817573
Condition 3: 24 Hour
Replicate 147.749435594485
Replicate 241.918023181032
Replicate 343.971174759362


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148679.p1 GENE.S_Transcript_148679~~S_Transcript_148679.p1 ORF type:5prime_partial len:113 (-),score=29.91,K-box|PF01486.13|3.9e-24 S_Transcript_148679:127-465(-)
GAAGAAATTGAAGCTTCAAAACGGAGACTTCTTGGAGAGAATTTAGCATCTTGCAGTTTAGAAGAGCTGCAACAGCTGGAGCAACAGCTGGAGAGGAGTGTTAGCAAAATTAGAGCAAGAAAGAACCAAGTCTTCAATGAACAAATACGGCAATTGAAAGAAAAGGAAAAACAACTTGCTGCTGAGAATGTAAGGCTTGCTGAAAAGTATGGATTATTACCAAAGGAATCGCCAAGCCAGGCACCATCTGAGGACACTAATAGCCAAATTTCCGATGTGGAGACCGATTTATTCATTGGATTGCCGGAGACGAGAATTAAGCGTGTCACTAATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148679.p1 GENE.S_Transcript_148679~~S_Transcript_148679.p1 ORF type:5prime_partial len:113 (-),score=29.91,K-box|PF01486.13|3.9e-24 S_Transcript_148679:127-465(-)
EEIEASKRRLLGENLASCSLEELQQLEQQLERSVSKIRARKNQVFNEQIRQLKEKEKQLAAENVRLAEKYGLLPKESPSQAPSEDTNSQISDVETDLFIGLPETRIKRVTNG*

Click here to download the sequence:
Link to NCBI Protein BLAST