Transcript Information: S_Transcript_148784.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value5.9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56027371021433
Replicate 20.2322398900791
Replicate 30.1941340640379
Condition 2: 8 Hour
Replicate 10.67343337843578
Replicate 20.94197257430428
Replicate 31.1218867160516
Condition 3: 24 Hour
Replicate 10.91978456802502
Replicate 20.47713287529152
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148784.p1 GENE.S_Transcript_148784~~S_Transcript_148784.p1 ORF type:5prime_partial len:95 (+),score=21.07 S_Transcript_148784:2-286(+)
GTGCAGTTAAGAGGCCAAATGAGTATACTAAGCGGGAGTAGTGTCAACTTTGGGCTGAAGGAATACCCAATCTCAGAGTTTGAGCTTGTTGCAGAAGAACTTCTCATGAGTGACTCCATAATGAAGGTTTTGGCTCATGATGCTGTATCATCATCAAGGAGTGGAACTTACCAGACTTTTGCAGCTGTGATCTTGCATGCTCTTTGCCTGTGGTTCATCAACCCATCATGGAGTTTATGGTGCATTACGTGTGATCGTAAAGATGTTACTGATGTGGAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148784.p1 GENE.S_Transcript_148784~~S_Transcript_148784.p1 ORF type:5prime_partial len:95 (+),score=21.07 S_Transcript_148784:2-286(+)
VQLRGQMSILSGSSVNFGLKEYPISEFELVAEELLMSDSIMKVLAHDAVSSSRSGTYQTFAAVILHALCLWFINPSWSLWCITCDRKDVTDVEF*

Click here to download the sequence:
Link to NCBI Protein BLAST