Transcript Information: S_Transcript_148968.p1


Annotated TAIR IDAT5G03420.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:845641-848705 | Forward length=598
E-Value2.5E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.831442491667
Replicate 211.376760729474
Replicate 312.668767143983
Condition 2: 8 Hour
Replicate 112.724542288676
Replicate 214.708563470318
Replicate 313.582473796176
Condition 3: 24 Hour
Replicate 111.787386487558
Replicate 211.477989288205
Replicate 312.959392981634


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148968.p1 GENE.S_Transcript_148968~~S_Transcript_148968.p1 ORF type:complete len:543 (+),score=148.06,AMPK1_CBM|PF16561.1|6.1e+03,AMPK1_CBM|PF16561.1|1.3e-16 S_Transcript_148968:210-1838(+)
ATGGCTACCCTTTCTCACTTAATATATCCACAAATTATCTCTTTCTCTTCCTCCCAACAAAATCGCTCTTCTTCCCTTTTCTTTCCTTCTCGTTTTCTCTTAAACCGTAGTAGGAGACAGTCCATAATATGTCTTGCTTCAACTGAGAAATCAAGGTCTAGTAGGAAGCTTATGAGTGATGAGGATCTGTGCAATGTGCTCCGTGAATTTGTGGCTTCAGTTGGACTGCCTGAAGGTCACGTGCCCTCCACCAAGGATTTATCGAAGCATGGAAGGAAAGACCTTGCTAACATTGTCAGAAGAAGAGGACATAAAGTTATCAAAGAGCTTCTCTCTAACACCACTGAAGCAGTGACTGATGTGTCTGATACACAGCAGAACTTAACGGACGAAGTCAGTGGAATTTATGTCCATGAAGAAACAGGTCAGAAGGAAAAAGTGAATGATTTGAGTGAAGAGTCTGCAGATATTACTTTGGTGAATGATAGTTTTGCTACTAAGAATAATTTGGAGACAAAGGATGAATCAGCTGTCAGCACAGATGATATTTATTTGAAAAATGACAGTTCTGCTACTGAGGAAAGTTTAGAGACAAAGTATGAATCAGAAGTCAGCCGGGACAATATTAGTTTAATGAAGGACAGTTCTGCTGCTGTACATAGTTTGGAGACAAAGTGTGAATCAGCTGTTGGGCCAGACGATAATACTTTGAAGAATGATAGCTCTGCTGTTGGGAATAGTTTGGATGCAAAATATGATCCAGCTGTCAGCTCAGATGATCAGAATCTCATACTTATGGAGTCTGCAGCTTCCTTACTGGAAAAGGTGGACACGTTTATGAGATACGGGCAATTGGATACTGTTGAAGATGATTTGGGCAACGATATAAAAGTGAACAGCATAACTGAAAGTGAAAGTTCAAGTAGTGGGGAGAATTTTGTTGAAAGTCAATCAGCAATCTATGGTGAAGTGGATGTAAAATGTTGGACTAGTGTTGGGAGCGATACAGGACTAAATGGCAGTTTGATGATAAAAAGCTTGCCCTCTCCCCCAACATTGGAAGACAATGCTACAAGTGATAGTTATTCATCTGCTCTAGGAAAACAAGATGGTGATTTTCATGCGGATGCCAGCAAAACGGAGAACGCAGTTGAGATCAATCATCTCAAACACATGCTGCATCAAAAAGAGTTGGAATTGTCTCGGTTGAAAGAAGAGATTGAGAAAGAGAAGGAAGCTCTGTCGATATTGCAAGCAAAGGCAGAAAGTGAAATTAGCAAAGCTCAAATGCTTATATCTGAAAAGGATGCAGAATTACATTCTGCTGAAGAAAGTCTTTCTGGACTTGTGGAGGCCAAGATTCAGTACTCTGGAGAAGGTCAGATGGTAGAAGTTGCAGGCAGCTTCAATGGGTGGCATCAAAGAATTAAATTGGAGCCTCCATTATCTTCTCGTTTCTTGGACCCTACTGATACAAGGAAGTCTAGGCTCTGGTCAACAACTTTGTGGCTTTATCCTGGTGTTTATGAGATAAAATTTGTTGTTGATGGCCAGTGGAAAATTGATCCCCAGAAAGAATCAACGATCAAGGGTGGTATAGAGAACAACCTCCTTCGGGTCGATAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148968.p1 GENE.S_Transcript_148968~~S_Transcript_148968.p1 ORF type:complete len:543 (+),score=148.06,AMPK1_CBM|PF16561.1|6.1e+03,AMPK1_CBM|PF16561.1|1.3e-16 S_Transcript_148968:210-1838(+)
MATLSHLIYPQIISFSSSQQNRSSSLFFPSRFLLNRSRRQSIICLASTEKSRSSRKLMSDEDLCNVLREFVASVGLPEGHVPSTKDLSKHGRKDLANIVRRRGHKVIKELLSNTTEAVTDVSDTQQNLTDEVSGIYVHEETGQKEKVNDLSEESADITLVNDSFATKNNLETKDESAVSTDDIYLKNDSSATEESLETKYESEVSRDNISLMKDSSAAVHSLETKCESAVGPDDNTLKNDSSAVGNSLDAKYDPAVSSDDQNLILMESAASLLEKVDTFMRYGQLDTVEDDLGNDIKVNSITESESSSSGENFVESQSAIYGEVDVKCWTSVGSDTGLNGSLMIKSLPSPPTLEDNATSDSYSSALGKQDGDFHADASKTENAVEINHLKHMLHQKELELSRLKEEIEKEKEALSILQAKAESEISKAQMLISEKDAELHSAEESLSGLVEAKIQYSGEGQMVEVAGSFNGWHQRIKLEPPLSSRFLDPTDTRKSRLWSTTLWLYPGVYEIKFVVDGQWKIDPQKESTIKGGIENNLLRVDR*

Click here to download the sequence:
Link to NCBI Protein BLAST