Transcript Information: S_Transcript_148987.p1


Annotated TAIR IDAT5G53730.1
Annotated Gene NameLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21808072-21808713 | Reverse length=213
E-Value7.2E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5106604938849
Replicate 21.3529069068287
Replicate 30.86994038130191
Condition 2: 8 Hour
Replicate 16.538445144404
Replicate 26.3316552753943
Replicate 39.451366390888
Condition 3: 24 Hour
Replicate 13.6064666140132
Replicate 24.8107147213945
Replicate 31.4276628908556


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148987.p1 GENE.S_Transcript_148987~~S_Transcript_148987.p1 ORF type:complete len:212 (+),score=29.47,LEA_2|PF03168.9|1.4e-11 S_Transcript_148987:142-777(+)
ATGTCTCAAATCCTCACAAAATCACCCAAACACTGCGCCAAGAAAGGGTTTATCAACTTCAACTTCCTCAACAAGAAGCTCTTCAAAATCCTATCAACCCTCATATTCTCCATCCTCTCTTTAATACTCCTCCTCTGGTTCATTCTTCACCCTGCAAAGCCTCAATTCATTCTCCAAGAAGCTGACATTTACCAGCTCAATTTCACATCACCCCAAATCCTTAACTCCTCCATAGAAATCACCTTAGAAGCACGAAACCCGAATCAAAAGGTAGGCATTTACTATGATGAGCTCCAAGCCTATGCCCAATACAAAGGCCAGCAAATAACCATGGACACACAAATTCCTCCATTCTATCAAGAGCAACAGGATAGCAACCTCCTTTCGGCTTCTCTTACTGGGGCTGCTCTCCCAATTGCTCCGTCTACTGGTTATCAAGTGGTTCGAGATCAAGCATCAGGGAAGCTAGTTTTGATCCTCAAGGTGGATGCAAAGATCCGTTGGAAAGTCGCAACATGGGTTTCAGGAAGTTGTAGGTTAAATGTTAACTGTGTTGCTATTATTCCTCTTAGAGCACTTAATCCTACAGGTCCTCTGATTTCAAAGCAGGGGACTCAATGTTCTACCACCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148987.p1 GENE.S_Transcript_148987~~S_Transcript_148987.p1 ORF type:complete len:212 (+),score=29.47,LEA_2|PF03168.9|1.4e-11 S_Transcript_148987:142-777(+)
MSQILTKSPKHCAKKGFINFNFLNKKLFKILSTLIFSILSLILLLWFILHPAKPQFILQEADIYQLNFTSPQILNSSIEITLEARNPNQKVGIYYDELQAYAQYKGQQITMDTQIPPFYQEQQDSNLLSASLTGAALPIAPSTGYQVVRDQASGKLVLILKVDAKIRWKVATWVSGSCRLNVNCVAIIPLRALNPTGPLISKQGTQCSTTI*

Click here to download the sequence:
Link to NCBI Protein BLAST