Transcript Information: S_Transcript_148995.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value6.9E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3578061854684
Replicate 22.7465921694049
Replicate 30.97859415953799
Condition 2: 8 Hour
Replicate 13.3946539688497
Replicate 24.0634582223177
Replicate 33.6541453037111
Condition 3: 24 Hour
Replicate 10.35665115903011
Replicate 20.41627409017781
Replicate 30.82357696016706


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_148995.p1 GENE.S_Transcript_148995~~S_Transcript_148995.p1 ORF type:complete len:490 (+),score=58.76,Pec_lyase_C|PF00544.15|6.9e-29,Beta_helix|PF13229.2|2.4e-07 S_Transcript_148995:417-1886(+)
ATGATCTCAAGAACCCACATTGTTGTCGTTCTTTTATGTTGCAGCTTTTTCTCTGGTTTTGCTTCTTCTTTTAATCTTACTCTCCCTCATCAACACCCTTTTCCAGAAGATATTGTTCATCAAGTTCACAGGAGAGTTAATCAATCTCTATGGAGAAGGCAAACCCTAGAAACAGAAGGCAAGGACCAGCTTACTTGTGCAACTGGTAACCCAATAGATGACTGTTGGAGATGTGACCCTAATTGGATTAACAATAGACAACATTTAGCTGATTGTGCAATTGGATTTGGCTATAAAGCTCTCGGAGGCAAAGGTGGGCCCATCTATGTGGTTACTGACCCATCTGACCCTGACCCACATAAGCCCAAACCCGGAACCCTTAGAGACGCGGTCACTAGACCAGGACCCTTATGGATTATATTCGCGAGTGACATGGTTATTAAGCTCAATTCTCCTCTAATGGTCTCAAGCTTTAAGACTATTGATGGTCGAGGAGCTCATGTGGAGGTCACTGGTGGTGGATGTATATCAATTGAGCATGTAACGAATGTTATAGTTCATAACATTTATATACATCATTGTTATCCTGCTAAGTCTGATGGTGATGGGTTACATATTTTTTCCTCTAGCAACATTTGGATTGATCATTGCTCGCTTTCGAATTGTGCTGATGGCCTAATTGATTGCACTATGGGATCAACTGCTATAACAATATCGAATTGCTTCTTTTCTCACCATGATAAGGTCATGTTGCTAGGGCATAGTGATGATCATCCTCAAGATCGTGGTATGCAGGTTACAGTTGCGTTCAATCGTTTTGGTGAGGCATTAGGACAAAGGATGCCTAGGTGTAGATTTGGTTATTTTCATGTTGTTAACAATGACTATACAAGTTGGGGAGAATATGCAGTTGGTGGGAGCTCGGCTCCTACTATCAACAGCCAAGGGAATCGTTACATTGCTCCATCAAGTCCAAATAACAAGGAGGTGACAAAGCGAATGGACACGCCGGATAACGAGTGGAAGAGCTGGAATTGGAGGACAGAAGGTGATGTAATGGTGAATGGAGCCTTCTTTGTACCCTCTGGTGAAGGAGTGAATACTCAATACACTCTTGCCTCAAGTATGGAGCCCAAATCAGCTGCTTATATTGACCAACTTACACTCAATGCTGGCCTTCTTTCAAACGGGGGCACAGGAGTGGGACTAGCCAATCCTGGTGCAGGCAGTGGTGGCGTTAGTAGTGGCGGTGGGGTAATACCTGGTGACGGTGGCGGTAATGGCTATAATAGCGGTGGTTATGGTACCGGACCACCTGGATATGGTAACGGATATTATGGCGGTGGAGATGGAGGGTGGATATTTAGCAAAGCACCCCCTCAAACCTCACACCAAACGTTTTTTTTGTTTGGTTTAGTTATTTTGAACTTTTTGTATGTCCATTATTCAAATCCTCTCCCAATCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_148995.p1 GENE.S_Transcript_148995~~S_Transcript_148995.p1 ORF type:complete len:490 (+),score=58.76,Pec_lyase_C|PF00544.15|6.9e-29,Beta_helix|PF13229.2|2.4e-07 S_Transcript_148995:417-1886(+)
MISRTHIVVVLLCCSFFSGFASSFNLTLPHQHPFPEDIVHQVHRRVNQSLWRRQTLETEGKDQLTCATGNPIDDCWRCDPNWINNRQHLADCAIGFGYKALGGKGGPIYVVTDPSDPDPHKPKPGTLRDAVTRPGPLWIIFASDMVIKLNSPLMVSSFKTIDGRGAHVEVTGGGCISIEHVTNVIVHNIYIHHCYPAKSDGDGLHIFSSSNIWIDHCSLSNCADGLIDCTMGSTAITISNCFFSHHDKVMLLGHSDDHPQDRGMQVTVAFNRFGEALGQRMPRCRFGYFHVVNNDYTSWGEYAVGGSSAPTINSQGNRYIAPSSPNNKEVTKRMDTPDNEWKSWNWRTEGDVMVNGAFFVPSGEGVNTQYTLASSMEPKSAAYIDQLTLNAGLLSNGGTGVGLANPGAGSGGVSSGGGVIPGDGGGNGYNSGGYGTGPPGYGNGYYGGGDGGWIFSKAPPQTSHQTFFLFGLVILNFLYVHYSNPLPIS*

Click here to download the sequence:
Link to NCBI Protein BLAST