Transcript Information: S_Transcript_149144.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26349506173446
Replicate 20.21844346096549
Replicate 30.73040538944953
Condition 2: 8 Hour
Replicate 10.63342743516237
Replicate 20.44300690375696
Replicate 30.21104799608892
Condition 3: 24 Hour
Replicate 10.4325719503088
Replicate 20.44878834804648
Replicate 30.99889284772737


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_149144.p1 GENE.S_Transcript_149144~~S_Transcript_149144.p1 ORF type:5prime_partial len:101 (+),score=11.59,Frigida|PF07899.7|3.2e-14 S_Transcript_149144:3-305(+)
TTCTTACAGCTTCTGGCGACTTTTTCAATCGCATCTGATTTTGATGCAGAGGAACTGAAGAAACTGGTGCCTTTGGTTTCACGCCGTCGCCAGGCTGCTGAACTCTTCTGTTCTCTTGGGTTATCTGACAAAATGGCCGGTCAGTTTCATATACTATGTGGATTTGGTATCTGCAGGAACAATGTCCTATGCTTTATGATGTATTGTGGGGATGTTTTCCTGAATTTTTCTCTGTATTCTTGGCCCTGTTACATATGTTTACACAAGCTTCCGGTTTATGTTTTAGGAAGCCTGCAAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_149144.p1 GENE.S_Transcript_149144~~S_Transcript_149144.p1 ORF type:5prime_partial len:101 (+),score=11.59,Frigida|PF07899.7|3.2e-14 S_Transcript_149144:3-305(+)
FLQLLATFSIASDFDAEELKKLVPLVSRRRQAAELFCSLGLSDKMAGQFHILCGFGICRNNVLCFMMYCGDVFLNFSLYSWPCYICLHKLPVYVLGSLQS*

Click here to download the sequence:
Link to NCBI Protein BLAST