Transcript Information: S_Transcript_149277.p1


Annotated TAIR IDAT3G47730.1
Annotated Gene NameATP-binding cassette A2
Annotated Gene Symbol(s)ATATH1, ATH1, ABCA2
Annotation TypeOrtholog
Chromosome Positionchr3:17594342-17598828 | Reverse length=983
E-Value1.2E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 20.91928289822978
Replicate 31.0245964490889
Condition 2: 8 Hour
Replicate 12.4435343071715
Replicate 21.7866406899782
Replicate 31.5542805545299
Condition 3: 24 Hour
Replicate 10.30340115959159
Replicate 20.55085653136955
Replicate 30.78818888765988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_149277.p1 GENE.S_Transcript_149277~~S_Transcript_149277.p1 ORF type:5prime_partial len:288 (+),score=60.39,AAA_21|PF13304.2|1.2e-10,ABC_tran|PF00005.23|2.6e-10 S_Transcript_149277:3-866(+)
TTCACACATGAACCAACCATCTCATTGACAGCTCTTATCTATGACAACTCTATCCGGAGTTCTGTTGGGATGGCAAATATTCGAAGAATGATAGGTGTTTGTCCACAGTTTGACATCCTCTGGAATGTATTAACTGGTGAAGAGCACCTTGAACTTTTTTCGAACATAAAAGGCCTGCCTTCTCATTCAATCCCAACGATCACTCAGAAGTTACTTGAGGATGTGCAGCTCGCCAAGTCAGCTAAAGTGAGATCAGGTAGCTACAGTGGAGGAATGAGACGTCGTCTTAGTGTTGCAGCAGCTCTTCTTGGTGATCCAAAGCTAGTTATACTAGATGAACCGACTACAGGTATGGATCCAATTACCAGGAGACATGTCTGGGACATCATAGAAAGTGCAAAAAGGGGACGATCCATTGTTCTAACAACACATTCAATGGAAGAAGCTGATGTTCTAAGTGATCGTATAGGGATTATGGCAAAGGGAAGGCTCCGCTGTGTAGGCACACCAATCAGAATGAAGATGCGGTTTGGGACTGGTTTTGTTGCTAATATGAGCTTTAGCAACAAGGAGGATGAAGCAACCATTGCTGAAGCTCGAGAGGCAGTGAAGCAGTTTTTAAAGAGGCAATTGGATGTTACACCCACAGAAGAGACAACAGGATATCTCACCTTCATCATTCCCCATGACAAAGAGCCGCTACTAAAGAGAACTTTTGGAGAGGTCCAAGAGAGGCAAAGTGAATTTTGTATATCTGACATACAGCTCGGCCTTGCAACTCTAGAAGAAGTATTTCTGAATGTGAATAAGAAGGCAGAGATGGAAGAAAAGGCAAAAGAGGAGAAATCTGACACATCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_149277.p1 GENE.S_Transcript_149277~~S_Transcript_149277.p1 ORF type:5prime_partial len:288 (+),score=60.39,AAA_21|PF13304.2|1.2e-10,ABC_tran|PF00005.23|2.6e-10 S_Transcript_149277:3-866(+)
FTHEPTISLTALIYDNSIRSSVGMANIRRMIGVCPQFDILWNVLTGEEHLELFSNIKGLPSHSIPTITQKLLEDVQLAKSAKVRSGSYSGGMRRRLSVAAALLGDPKLVILDEPTTGMDPITRRHVWDIIESAKRGRSIVLTTHSMEEADVLSDRIGIMAKGRLRCVGTPIRMKMRFGTGFVANMSFSNKEDEATIAEAREAVKQFLKRQLDVTPTEETTGYLTFIIPHDKEPLLKRTFGEVQERQSEFCISDIQLGLATLEEVFLNVNKKAEMEEKAKEEKSDTSV*

Click here to download the sequence:
Link to NCBI Protein BLAST