Transcript Information: S_Transcript_14944.p1


Annotated TAIR IDAT1G71210.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26838850-26841489 | Reverse length=879
E-Value1.1E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6772500127187
Replicate 29.01786406251
Replicate 39.0631230364028
Condition 2: 8 Hour
Replicate 110.280102352565
Replicate 29.0045818237901
Replicate 310.342010304445
Condition 3: 24 Hour
Replicate 19.8489412305487
Replicate 27.6724603932408
Replicate 39.207423386579


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14944.p1 GENE.S_Transcript_14944~~S_Transcript_14944.p1 ORF type:complete len:641 (+),score=114.16,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|4.7e-08,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|0.004,PPR_2|PF13041.2|0.87,PPR_2|PF13041.2|23,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.9e-05,PPR_2|PF13041.2|5.3e-07,PPR_2|PF13041.2|1.8,PPR|PF01535.16|0.035,PPR|PF01535.16|0.079,PPR|PF01535.16|1.8,PPR|PF01535.16|0.11,PPR|PF01535.16|0.51,PPR|PF01535.16|0.6,PPR|PF01535.16|0.11,PPR|PF01535.16|9.2,PPR|PF01535.16|0.22,PPR|PF01535.16|2e+03,PPR|PF01535.16|0.31,PPR|PF01535.16|87,PPR|PF01535.16|0.33,PPR|PF01535.16|0.0012,PPR|PF01535.16|50,PPR|PF01535.16|0.015,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.9,PPR_1|PF12854.3|51,PPR_1|PF12854.3|84,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|22,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|44,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|0.0001,PPR_3|PF13812.2|25,PPR_3|PF13812.2|4.7e+03,PPR_3|PF13812.2|22,PPR_3|PF13812.2|71,PPR_3|PF13812.2|10,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|90,PPR_3|PF13812.2|4.1 S_Transcript_14944:290-1924(+)
ATGGAGTTCTTCCAGACTAAGAAGTCTCTTGAAGGGTATATTCCTGAGGTGTTCCGTTATAACTTTTTGATGCATAGGCTTCTTAGGGAGAATCGTCTTGAGGAGGTTTCCGATTTGTTGATGGATATGAAGGAGAGTCAAATCATGCCTGATAAGCTCACTATGAATATTGCGCTGGCCTTCTTTTGCAAGGCTGGTTTCATGGATGTTGCCCTTGAGTTGTATAAGATGAAGTCCGAGTTTGGGTTTACCCCAAATAGCTTGGTTTACAATTATCTAATAAACAATTTATGTGGAGATGGTAGCACGGATGAAGCATACAGGGTGCTGAAGAATTCAATGATTCAGGGTTGCTTTCCTGGTAAGAGGACCTTCTCTATTCTTGCTGATGCGCTGTGTAGGGAGGGCAAGCTTGATAAGATGAAGGACCTCGTTTTGTTTGCCTTGGAGTGCAAATTCATGCCAGCTATTTCCACGTACGAGAAATTCATTAAAGCCCTTTGTAAGGCTAGAAGGGTTGAAGATGGTTACTTAATTCACGGAGAGCTCAGCAGATTGAATAAAGAAATGAGTGAATGTACATACTCTTACTTGATACATGGCTTCAAGGACGTTAGCAGGGGAGACATTGCTGCTAGACTTCTTATTGAAATGCAAGAAAAAGGCCATAAACCATCACGCAAACTGTTTAGAGCTGTCATCTGTTGCTTATGTCAGATGGAGAGTCCTGAAAAGCACTTTCTTCAGTTGCTGGAGATGCAATTGTCTTCCTTCGGACCTAAGCAGCCTGTGCTCAATTTCTTCATTGATGGGGCTGGGCATGCCAGACGTCCCGAGCTTGCTAGAGAAGTTTATGGGATGATGAAGAGAATCGGCAGTGGCCCCAATTTGAGCTCAGACATTCTAATGCTGCAGTCTTACTTAAGGAGTGAGAGGATAGCTGATGCACTGAACTTTTTTGAGGATGTGAGCAAAAGTAGAAAGGTAGGTAGGAAACTGTACAATGCCATGGTGGTTGGCCTTTCCAAAGTGGGAAAAGCAGAATTTGCTTTGGCCTTATTGAACCAAGAGAGAAATGAAGGTCTTGTGCCAAGTTTGGAATGCTATGAAGAGCTTATCAAGTTGTACTGCTCAGAGAAGAAATATGATGAAGCTATAAAACTAGTCAATGACATGGAGAAAGCTGGACGAAGAATTTCATCATTTATCGGCAATATATTTTTGTTACACTCTCTGCAATCTACGGATCTCTGCAAGGCATGGATTCGTTCACGAGATGTATCCAATGAGACGCCTAGTAGTTCAATGCTTGGCCAGTTGATTACTACGTTTTCTGGCCTTATTAGGGTGAATTCTAGTGTTGAGGACTTGGAAAATGTTGTTCAAAGGTGCTTTCCGCTTGACCTCTACTCCTATAACCTCCTGCTGAGAAAATTAAGCATTGATCAGATGGATGAAGCTTGTCAATTATTCAAACGATTATGTCAGATTGGTTATGAACCAAATAGATGGACTTATGACATACTTGTGCATGGCCTTTTTAAGCATGGTAGAATAACTGAAGCCAAAATCTGTGCTAAAGAAATGTTACGGCAGGGACATTTTCCGACTGAACGCATGAAGCTATTAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14944.p1 GENE.S_Transcript_14944~~S_Transcript_14944.p1 ORF type:complete len:641 (+),score=114.16,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|4.7e-08,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|0.004,PPR_2|PF13041.2|0.87,PPR_2|PF13041.2|23,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|2.9e-05,PPR_2|PF13041.2|5.3e-07,PPR_2|PF13041.2|1.8,PPR|PF01535.16|0.035,PPR|PF01535.16|0.079,PPR|PF01535.16|1.8,PPR|PF01535.16|0.11,PPR|PF01535.16|0.51,PPR|PF01535.16|0.6,PPR|PF01535.16|0.11,PPR|PF01535.16|9.2,PPR|PF01535.16|0.22,PPR|PF01535.16|2e+03,PPR|PF01535.16|0.31,PPR|PF01535.16|87,PPR|PF01535.16|0.33,PPR|PF01535.16|0.0012,PPR|PF01535.16|50,PPR|PF01535.16|0.015,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.9,PPR_1|PF12854.3|51,PPR_1|PF12854.3|84,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|22,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|44,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|0.0001,PPR_3|PF13812.2|25,PPR_3|PF13812.2|4.7e+03,PPR_3|PF13812.2|22,PPR_3|PF13812.2|71,PPR_3|PF13812.2|10,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|90,PPR_3|PF13812.2|4.1 S_Transcript_14944:290-1924(+)
MEFFQTKKSLEGYIPEVFRYNFLMHRLLRENRLEEVSDLLMDMKESQIMPDKLTMNIALAFFCKAGFMDVALELYKMKSEFGFTPNSLVYNYLINNLCGDGSTDEAYRVLKNSMIQGCFPGKRTFSILADALCREGKLDKMKDLVLFALECKFMPAISTYEKFIKALCKARRVEDGYLIHGELSRLNKEMSECTYSYLIHGFKDVSRGDIAARLLIEMQEKGHKPSRKLFRAVICCLCQMESPEKHFLQLLEMQLSSFGPKQPVLNFFIDGAGHARRPELAREVYGMMKRIGSGPNLSSDILMLQSYLRSERIADALNFFEDVSKSRKVGRKLYNAMVVGLSKVGKAEFALALLNQERNEGLVPSLECYEELIKLYCSEKKYDEAIKLVNDMEKAGRRISSFIGNIFLLHSLQSTDLCKAWIRSRDVSNETPSSSMLGQLITTFSGLIRVNSSVEDLENVVQRCFPLDLYSYNLLLRKLSIDQMDEACQLFKRLCQIGYEPNRWTYDILVHGLFKHGRITEAKICAKEMLRQGHFPTERMKLLI*

Click here to download the sequence:
Link to NCBI Protein BLAST