Transcript Information: S_Transcript_149810.p1


Annotated TAIR IDAT1G19290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6666249-6668963 | Forward length=904
E-Value1E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9427837904286
Replicate 22.4926709355846
Replicate 33.2806790148713
Condition 2: 8 Hour
Replicate 13.332092237052
Replicate 23.065373491501
Replicate 33.7917613528092
Condition 3: 24 Hour
Replicate 14.0434039153263
Replicate 23.2143386610685
Replicate 34.1834640960409


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_149810.p1 GENE.S_Transcript_149810~~S_Transcript_149810.p1 ORF type:3prime_partial len:416 (+),score=64.51,PPR_2|PF13041.2|4.6e+03,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|3.9e-07,PPR_2|PF13041.2|6.7e-15,PPR_2|PF13041.2|8.4e-09,PPR_1|PF12854.3|8.8,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|2.1e-07,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|5.6e-12,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|0.0021,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|3.9e-06,PPR|PF01535.16|1.3e-09,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|5,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|0.83,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|0.00078,MRP-S27|PF10037.5|0.16,MRP-S27|PF10037.5|74,MRP-S27|PF10037.5|0.12 S_Transcript_149810:253-1497(+)
ATGTTTTTCCGTCGTTATATCCACTGGTATCCCCGTGATGAGACCAAGCTCCCATCATCTGAACTCCTCTCACGGTTATGCCGTCTCTTAGTTCTTCATCGTTTCAATGCTGTCACCAAACTCCCATTCAAGTTCTCAGACGACGTCGTTGTGGCTGTTCTTAAAGAAATCAAGTTAAACCCAGAAGCTTGTCTTGGGTTTTTCCAATTAGCCCTTAAACAGCAACGTTACAGGCCGGGGTTCAAGTCTTATTGTGTACTTGTTCATATTTTATCGAGGGCAAGATTGTTTGATGAAACTAGGCTTTACTTGAGCCAACTCGTGGACGTATGTTTTGATAGCAAGTGTAATATTAATGTTTTGTGGAGAGAGTTGGTTGTTGTTTATAAAGATTTTAAATTTTCTCCGACTGTGTTTGATATGATTTTGAAGGTGTATGCTGAAAAGGGTTTGTATAAAGATGCCTTGTATGTGTTTGATAATATGGGTAACTGTGGCTCTCGGCCGAGCTTGCGGTCTTGTAATAGTTTGTTAAGTTGTTTGGTTAAGAAAAGGGAATGTGGTATGGCTTTGTGTATTTATGATCAAATGATTAGGATCGGAATTAGCCCGGATGTGTTTACTTGTAGTATAGTTGTGAATGCTTATTGTAAGGATGGGCGAGTTGGGGAAGCGGTTGAGTTTGTCAAGGGGATGGAGTATCAGGGTTTGGAGCTGAATGCAGTGATGTTTCATAGCTTGATTAATGGTTATGTTAGCTTAGGAGATATGAAGGGGGCTAATGGTGTTTTGGGTTTGATGGATGCAAAGGGAGTAGCTAGAAATGCAATCACTTTTACGCTTCTATTGAAAGGATATTGCAAACATCATAAGATGAGTGAAGCCGAAGATATGCTTTGTCGAATGAAGGAGTCTTTGCTGGTTGATGGTTATGCTTATGGAGTTTTAATTGATGGGTATTGCCAGATGGGCAAAATGGATGATGCTGTTAGAGTTCAAAATGAGATGTTGAACTCTGGTTTGAAAATGAATTTGGTCATTTGTAACTCCTTGATCAATGGTTATTGCAAGATTGGTCAAGTTAACAATGCGAAAGAGGTAGTAGTGCGTATGGTGGATTGGGGTTTGAAACTTGATTGCTATAGTTTCAGTACTTTGATTGATGGGTATTGTAGAGAAGGCTGTATGAGTGAGGCTTTTACTCTTTTTGACAAGATGATGGATGAAGGGATTAAACCTAGTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_149810.p1 GENE.S_Transcript_149810~~S_Transcript_149810.p1 ORF type:3prime_partial len:416 (+),score=64.51,PPR_2|PF13041.2|4.6e+03,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|3.9e-07,PPR_2|PF13041.2|6.7e-15,PPR_2|PF13041.2|8.4e-09,PPR_1|PF12854.3|8.8,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|2.1e-07,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|5.6e-12,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|0.0021,PPR|PF01535.16|9.5e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|3.9e-06,PPR|PF01535.16|1.3e-09,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|5,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|0.83,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|0.00078,MRP-S27|PF10037.5|0.16,MRP-S27|PF10037.5|74,MRP-S27|PF10037.5|0.12 S_Transcript_149810:253-1497(+)
MFFRRYIHWYPRDETKLPSSELLSRLCRLLVLHRFNAVTKLPFKFSDDVVVAVLKEIKLNPEACLGFFQLALKQQRYRPGFKSYCVLVHILSRARLFDETRLYLSQLVDVCFDSKCNINVLWRELVVVYKDFKFSPTVFDMILKVYAEKGLYKDALYVFDNMGNCGSRPSLRSCNSLLSCLVKKRECGMALCIYDQMIRIGISPDVFTCSIVVNAYCKDGRVGEAVEFVKGMEYQGLELNAVMFHSLINGYVSLGDMKGANGVLGLMDAKGVARNAITFTLLLKGYCKHHKMSEAEDMLCRMKESLLVDGYAYGVLIDGYCQMGKMDDAVRVQNEMLNSGLKMNLVICNSLINGYCKIGQVNNAKEVVVRMVDWGLKLDCYSFSTLIDGYCREGCMSEAFTLFDKMMDEGIKPSV

Click here to download the sequence:
Link to NCBI Protein BLAST