Transcript Information: S_Transcript_15011.p1


Annotated TAIR IDAT2G39730.1
Annotated Gene Namerubisco activase
Annotated Gene Symbol(s)RCA
Annotation TypeOrtholog
Chromosome Positionchr2:16570951-16573345 | Reverse length=474
E-Value1.1E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18727.9903378248
Replicate 210179.108228788
Replicate 311353.819739323
Condition 2: 8 Hour
Replicate 12685.1344036754
Replicate 22735.4350266148
Replicate 32304.835764014
Condition 3: 24 Hour
Replicate 112766.032360961
Replicate 211328.348687702
Replicate 311685.836896577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_15011.p1 GENE.S_Transcript_15011~~S_Transcript_15011.p1 ORF type:complete len:446 (+),score=88.76,AAA|PF00004.25|5.2e-15 S_Transcript_15011:374-1711(+)
ATGGCTGCTGCTTTCTCTACCGTCGGAGCTGCTGCTGTCAACAGGGCACCCTTGAGCTCAAATGGGTCAGGAGCTGGTGGCATGCTGCCAAGCTCAGCCTTCATGGGAAGCAGCTTGAAGAAGATGACGAGTGCAAGGTTCCCAAGCTCAAAGATGTCCAGCACCAGCCTAAGGGTGGTGTCTGAGTACGATGAGGAGAAGCAGACCGAAAAGGACAGGTGGTCCGGTTTGGGTACCGATGTGTCTGATGACCAGCAGGACATCACCAGAGGAAAGGGTATGGTCGACCCCCTCTTCCAGGCTCCTATGAACACGGGTACCCACTACGCCGTCATGAGCTCCTACGAGTACCTCAGCCATGGGCTTAGAAACTACGATTTGGACAACAACTTGGATGGTCTCTACATTGCCCCCGCTTTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGGACTTGCCTAACATCAAGGTTCCTCTCATCTTGGGTATCTGGGGAGGCAAAGGTCAGGGTAAATCCTTCCAATGTGAGCTTGTCTTCCGCAAGATGGGTATCAACCCAATCATGATGAGTGCCGGAGAGTTGGAGAGTGGAAACGCAGGAGAGCCAGCCAAGCTTATCAGGCAAAGGTACCGTGAGGCAGCCGACATCATTGCTAAGGGAAAGATGTGTTGTCTGTTCATCAACGATCTTGACGCAGGAGCAGGGCGTATGGGTGGAACCACTCAATACACAGTGAACAACCAGATGGTGAACGCCACCCTGATGAACATTGCTGACAACCCCACCAACGTCCAGCTCCCCGGTATGTACAACAAGGTTGAGAACAAGCGTGTCCCCATCATCGTCACTGGTAACGATTTCTCCACCTTGTACGCTCCCCTCATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCCACCCGTGAGGACCGTATTGGTGTTGCCACTGGTATCTTCCGCTCTGACAATGTCCCACCAGAGGACATTGTCAAGCTTGTTGACACCTTCCCCGGTCAATCCATTGATTTCTTCGGAGCCCTGAGGGCAAGAGTGTACGATGACGAAGTGAGGAAGTTCGTGGTGGGAATTGGTGTAGACCAAGTAGGAAAGAGGTTGGTGAACTCAGTAGAGGGACCTCCGGTATTCGAGCAACCAAAGATGTCATTGGAAAAGCTGTTGGAATACGGATTCATGCTTGTCAAGGAGCAAGAGAACGTCAAGAGAGTCCAGCTTGCTGACAAGTACATGAGCGAAGCTGCTCTCGGAAACGCCAACCAGGATGCCATTGACAGAGGAACTTTCTTCGGAGCCCCAGCAGCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_15011.p1 GENE.S_Transcript_15011~~S_Transcript_15011.p1 ORF type:complete len:446 (+),score=88.76,AAA|PF00004.25|5.2e-15 S_Transcript_15011:374-1711(+)
MAAAFSTVGAAAVNRAPLSSNGSGAGGMLPSSAFMGSSLKKMTSARFPSSKMSSTSLRVVSEYDEEKQTEKDRWSGLGTDVSDDQQDITRGKGMVDPLFQAPMNTGTHYAVMSSYEYLSHGLRNYDLDNNLDGLYIAPAFMDKLVVHITKNFLDLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIAKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKVENKRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVATGIFRSDNVPPEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKFVVGIGVDQVGKRLVNSVEGPPVFEQPKMSLEKLLEYGFMLVKEQENVKRVQLADKYMSEAALGNANQDAIDRGTFFGAPAAK*

Click here to download the sequence:
Link to NCBI Protein BLAST