Transcript Information: S_Transcript_150110.p1


Annotated TAIR IDAT1G79590.1
Annotated Gene Namesyntaxin of plants 52
Annotated Gene Symbol(s)SYP52, ATSYP52
Annotation TypeOrtholog
Chromosome Positionchr1:29947064-29948304 | Forward length=233
E-Value4.3E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.106512267685
Replicate 227.414189577848
Replicate 327.546384533378
Condition 2: 8 Hour
Replicate 140.109883064565
Replicate 241.982915957955
Replicate 335.919470857756
Condition 3: 24 Hour
Replicate 139.971488940236
Replicate 227.100132140228
Replicate 331.339731771463


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150110.p1 GENE.S_Transcript_150110~~S_Transcript_150110.p1 ORF type:complete len:235 (+),score=46.95,SNARE|PF05739.15|3.1e-07 S_Transcript_150110:211-915(+)
ATGGCTTCCACATCTGGGGACTCTTGGATGAAGGAGTACAATGAAGCAGCGAAATTAGCTGATGATATTAATGCCATGATATCTGAGAAGACTTCAATGTCAGCTTCAGGACCAGAGACACAACGTCACTTCTCTTCTGTTCGGCGAAAGATTACGATTCTGGGGACTAGGCTGGATAGCCTGGAGTCCCTATTAGCTAAGCTTCCTAGCAAACAAACCATAACACAGAAAGAGTTGAATCGGCGCAAAGACATGCTTTCTAATTTGAGATCAAAGACAAACCAGATGGCAACCACTCTGAACATGTCAAATTTTGCCAACAGAGACAGCTTACTCGGCCCAGAGACAAAATCTGTTGATGCTGCCACTATGACTGCTGGTTTGGATAATCAAGGCATTGTCAATCTTCAACGACAAGTGATGAAAGATCAAGATGAGGGGCTTGAAAAGTTGGAGGATACTGTTATAAGTACAAAACATATTGCACTCACTGTGAATGAAGAACTTGACCTACATACAAGGCTCATTGATACCTTGGATCAGCATGTTGAAGTCACGGGCTCCCGGCTGCAGCGTATTCAGAGGAATCTCGCAATATTGAACAGGAAAACCAAGGGTGGATGCTCCTGTTTGTGCCTGCTGTTGGCAGTTGCTGGAATTATTGTTCTAATTCTTGCCATCTTTGTGTTGATCAAGTATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150110.p1 GENE.S_Transcript_150110~~S_Transcript_150110.p1 ORF type:complete len:235 (+),score=46.95,SNARE|PF05739.15|3.1e-07 S_Transcript_150110:211-915(+)
MASTSGDSWMKEYNEAAKLADDINAMISEKTSMSASGPETQRHFSSVRRKITILGTRLDSLESLLAKLPSKQTITQKELNRRKDMLSNLRSKTNQMATTLNMSNFANRDSLLGPETKSVDAATMTAGLDNQGIVNLQRQVMKDQDEGLEKLEDTVISTKHIALTVNEELDLHTRLIDTLDQHVEVTGSRLQRIQRNLAILNRKTKGGCSCLCLLLAVAGIIVLILAIFVLIKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST