Transcript Information: S_Transcript_150113.p1


Annotated TAIR IDAT1G79590.1
Annotated Gene Namesyntaxin of plants 52
Annotated Gene Symbol(s)SYP52, ATSYP52
Annotation TypeOrtholog
Chromosome Positionchr1:29947064-29948304 | Forward length=233
E-Value3.7E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80297848554424
Replicate 21.7117681553244
Replicate 31.8283746979432
Condition 2: 8 Hour
Replicate 12.3899144320925
Replicate 21.5428861130846
Replicate 31.3781798020462
Condition 3: 24 Hour
Replicate 10.84743082506615
Replicate 23.0283541330464
Replicate 31.1958727950702


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150113.p1 GENE.S_Transcript_150113~~S_Transcript_150113.p1 ORF type:complete len:232 (+),score=35.55 S_Transcript_150113:211-906(+)
ATGGCTTCCACATCTGGGGACTCTTGGATGAAGGAGTACAATGAAGCAGCGAAATTAGCTGATGATATTAATGCCATGATATCTGAGAAGACTTCAATGTCAGCTTCAGGACCAGAGACACAACGTCACTTCTCTTCTGTTCGGCGAAAGATTACGATTCTGGGGACTAGGCTGGATAGCCTGGAGTCCCTATTAGCTAAGCTTCCTAGCAAACAAACCATAACACAGAAAGAGTTGAATCGGCGCAAAGACATGCTTTCTAATTTGAGATCAAAGACAAACCAGATGGCAACCACTCTGAACATGTCAAATTTTGCCAACAGAGACAGCTTACTCGGCCCAGAGACAAAATCTGTTGATGCTGCCACTATGACTGCTGGTTTGGATAATCAAGGCATTGTCAATCTTCAACGACAAGTGATGAAAGATCAAGATGAGGGGCTTGAAAAGTTGGAGGATACTGTTATAAGTACAAAACATATTGCACTCACTGTGAATGAAGAACTTGACCTACATACAAGGCTCATTGTACGGTTTCTAAAAAAGATCTTGGATTGTTCTAAAACTTCAGCTGTTATTTGTCCTCTAAATTTAACTAATGTATTTACGGTAGTTTTTGAGTCCATTTTCAATGGGGCCAAATGTTTTACTATACTTTGGGCCTTGGAATATTATGGACTAGATCAAAATGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150113.p1 GENE.S_Transcript_150113~~S_Transcript_150113.p1 ORF type:complete len:232 (+),score=35.55 S_Transcript_150113:211-906(+)
MASTSGDSWMKEYNEAAKLADDINAMISEKTSMSASGPETQRHFSSVRRKITILGTRLDSLESLLAKLPSKQTITQKELNRRKDMLSNLRSKTNQMATTLNMSNFANRDSLLGPETKSVDAATMTAGLDNQGIVNLQRQVMKDQDEGLEKLEDTVISTKHIALTVNEELDLHTRLIVRFLKKILDCSKTSAVICPLNLTNVFTVVFESIFNGAKCFTILWALEYYGLDQNG*

Click here to download the sequence:
Link to NCBI Protein BLAST