Transcript Information: S_Transcript_150142.p1


Annotated TAIR IDAT5G18620.2
Annotated Gene Namechromatin remodeling factor17
Annotated Gene Symbol(s)CHR17
Annotation TypeOrtholog
Chromosome Positionchr5:6196190-6202058 | Reverse length=1072
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.954311282232
Replicate 227.301637270979
Replicate 327.236859274043
Condition 2: 8 Hour
Replicate 132.667369144102
Replicate 234.464739796336
Replicate 335.368669915987
Condition 3: 24 Hour
Replicate 131.607606517761
Replicate 225.638983752393
Replicate 330.432003384551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_150142.p1 GENE.S_Transcript_150142~~S_Transcript_150142.p1 ORF type:5prime_partial len:1036 (+),score=290.99,SNF2_N|PF00176.19|2.4e-72,SNF2_N|PF00176.19|1.3e+03,SLIDE|PF09111.6|4.5e+02,SLIDE|PF09111.6|5.1e+03,SLIDE|PF09111.6|6e-45,Helicase_C|PF00271.27|2.4e-19,ResIII|PF04851.11|4e+03,ResIII|PF04851.11|2.6e-07,HAND|PF09110.7|4.9e+03,HAND|PF09110.7|1.6e+04,HAND|PF09110.7|3e-07,HAND|PF09110.7|1.4e+04 S_Transcript_150142:2-3109(+)
GAAGACGATGATGAGGAACTCGAAGCCGTTGCTCGACCTGCTGATTCTGATGAAGAAGATGCCGATAATGATGGTGATGGTGGTGATGAAGACGGAGATGATGATGAGGATCGGAATACTGGATATGATAATGAAATTTCAAAGCGTGAAAGGGCAAGGTTGAAAGAAATGCAGAAGATGAAGAAGCAGAAGATTCAGGAAATATTGGATAAGCAAAATGCAGCTATTGATGCTGATATGAATAACAAGGGCAAGGGGCGATTGAACTACCTTCTTCAGCAAACAGAGATATTTGCACATTTTGCTAAAGGGAGTGATCAAGCTCTAGCACAAAAAAAGGCAAAGGGAAGGGGCCGGCATGCATCAAAGGTGACTGAAGAAGAAGAAGATGAAGAATATCTTAAAGAGGAAGAAGCTGGGACTGCCAACACAAGGCTGGTTACTCAGCCTTCTTGTATCCAGGGAAAGATGAGAGACTATCAGCTTGCTGGGCTGAATTGGCTCATTCGGCTTTATGAGAATGGTATAAATGGAATCCTTGCTGATGAAATGGGTCTTGGAAAAACTTTGCAAACCATTTCATTATTGGGCTATCTCCATGAGTTCAGAGGAATTACTGGGCCACACATGGTTGTTGCTCCAAAATCAACCCTTGGCAACTGGATGAATGAAATAAAACGATTTTGTCCTGTTTTGCGTGCTGTAAAATTCCTTGGAAATCCAGAGGAAAGGAGACATATACGTGAGGATCTGTTGGTTGCTGGAAAATTTGATGTTTGTGTCACTAGTTTTGAAATGGCGATCAAAGAGAAGTCGGCGTTGCGTCGCTTTAGCTGGCGATATATTATTATTGATGAAGCTCATCGAATTAAAAATGAAAACTCTCTGCTTTCAAAAACCATGAGGCTTTATCATACCAACTATCGTCTACTCATCACTGGAACTCCTCTTCAGAATAATCTCCATGAATTATGGTCGCTTCTCAACTTCTTATTGCCAGAAATTTTTAGCTCAGCAGAAACATTTGATGAATGGTTTCAAATTTCTGGTGACAATGACCAGCAGGAGGTTGTTCAACAACTACATAAGGTCCTGCGACCTTTTCTTCTTCGTAGGTTGAAGTCAGATGTTGAGAAAGGCTTGCCCCCCAAAAAGGAAACGATACTTAAAGTGGGGATGTCTCAGATGCAAAAGCAGTACTACAGAGCTCTTCTGCAGAAGGATCTTGAAGTTGTTAATGCTGGTGGAGAGCGTAAGCGCCTTCTAAACATAGCTATGCAGTTGCGTAAATGCTGTAATCACCCATATCTATTCCAAGGTGCAGAACCTGGCCCACCCTACACCACTGGAGAACATCTTATTACCAATGCTGGAAAAATGGTCTTGCTTGACAAGTTGCTTCCCAAACTGAAGGAGCGTGGTTCCAGGGTTCTAATATTTTCACAGATGACAAGGCTGCTCGATATTCTTGAGGACTATCTTATGTTTCGTGGTCATCAGTACTGTCGTATTGATGGTAATACTGGCGGTGAAGATCGCGATGCTTCCATTGATGTCTTCAACAAGCCAGGAAGTGAGAAGTTTGTTTTCTTACTATCAACAAGAGCTGGAGGCCTTGGCATCAATCTTGCGACTGCAGATATTGTCATCCTTTATGACAGTGACTGGAATCCGCAAGTTGATTTGCAAGCACAGGACAGAGCTCATCGAATTGGTCAAAAGAAGGAAGTTCAAGTTTTTCGTTTCTGTACTGAGTATACTATTGAGGAAAAAGTGATTGAAAGAGCTTATAAGAAACTTGCACTTGATGCTTTGGTTATTCAACAAGGACGATTAGCTGAGCAAAAAACTGTGAACAAGGACGAGTTGTTGCAGATGGTGAGATTTGGTGCTGAAATGGTATTTAGCTCTGGGGATAGTACAATTACAGATGAAGATATAGATCGAATCATTGCCAAGGGAGAAGAGGCAACTGCTGAACTTGATGCAAAGATGAAGAAATTCACCGAGGATGCTATCAAGTTTAAAATGGATGACACTGCTGATCTGTATGACTTCGATGATGAGAAGAAGGATGAGAACAAGGTTGACTTCAAGAAACTTGTGAGTGACAACTGGATTGAACCGCCAAAGCGAGAGAGGAAGCGCAATTATTCAGAGTCGGAGTATTTTAAGCAGACAATGCGTCAAAGTGGTCCGGCTAGACCTAAAGAGCCTCGTATTCCTCGTATGCCTCAGTTGCATGATTTCCAGTTTTTCAACACTCAAAGGCTAAATGAACTTTATGAGAAGGAAGTGCGTCATCTCATGCAAACACATCAGAAAAACCAGATGAAAGACACAATAGAAGTTGATGAACCAGATGAAATGACAGATCCTCCACTCACTGCTGAAGAGCAAGAGGAAAAGGAGCGTTTGTTGGAAGAGGGGTTCTCAACTTGGACAAGGAGAGATTTCAATACTTTCATCAGAGCTTGTGAGAAGTATGGTAGGAATGACATTAAGAGCATAGCTGCTGAGATGGAAGGGAAAATGTTTGAGGAAGTTGAAAGATATGCTAAAGTCTTCAAGGAGAGATACAAGGAGTTAAATGATTATGATAGGATCATTAAGAACATCGAAAGAGGGGAAGCTAGAATTTCCAGAAAAGATGAGATAATGAAAGCAATTGGAAAGAAACTAGATCGTTACAAGAACCCATGGTTGGAGTTGAAGATCCAGTATGGTCAGAACAAAGGGAAGCTATACAATGAAGAGTGTGATCGCTTCATGATCTGCATGGTTCACAAACTCGGTTATGGAAATTGGGATGAGCTTAAGGCTGCTTTCCGAACATCACCATTGTTCCGTTTTGATTGGTTTGTTAAATCCCGCACTACGCAAGAATTGGCTAGGAGGTGTGATACTCTCATTAGGCTAGTAGAGAGAGAGAATCAGGAGTATGACGAAAGGGAGAGACAGGCACGCAAAGAGAAGAAGCTTGCTAAGAATGCCACACCTTCAAAGCGCGGTGCAGCTCGTCAGCAAGCTGAAAGCCCCACTTCCTTGAAGAAACGAAAGCAGTTAACAATGGATGACTACGGTGGCTCAGGGAAGAGGAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_150142.p1 GENE.S_Transcript_150142~~S_Transcript_150142.p1 ORF type:5prime_partial len:1036 (+),score=290.99,SNF2_N|PF00176.19|2.4e-72,SNF2_N|PF00176.19|1.3e+03,SLIDE|PF09111.6|4.5e+02,SLIDE|PF09111.6|5.1e+03,SLIDE|PF09111.6|6e-45,Helicase_C|PF00271.27|2.4e-19,ResIII|PF04851.11|4e+03,ResIII|PF04851.11|2.6e-07,HAND|PF09110.7|4.9e+03,HAND|PF09110.7|1.6e+04,HAND|PF09110.7|3e-07,HAND|PF09110.7|1.4e+04 S_Transcript_150142:2-3109(+)
EDDDEELEAVARPADSDEEDADNDGDGGDEDGDDDEDRNTGYDNEISKRERARLKEMQKMKKQKIQEILDKQNAAIDADMNNKGKGRLNYLLQQTEIFAHFAKGSDQALAQKKAKGRGRHASKVTEEEEDEEYLKEEEAGTANTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIKRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYHTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLITNAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMFRGHQYCRIDGNTGGEDRDASIDVFNKPGSEKFVFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSGDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTADLYDFDDEKKDENKVDFKKLVSDNWIEPPKRERKRNYSESEYFKQTMRQSGPARPKEPRIPRMPQLHDFQFFNTQRLNELYEKEVRHLMQTHQKNQMKDTIEVDEPDEMTDPPLTAEEQEEKERLLEEGFSTWTRRDFNTFIRACEKYGRNDIKSIAAEMEGKMFEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEYDERERQARKEKKLAKNATPSKRGAARQQAESPTSLKKRKQLTMDDYGGSGKRRK*

Click here to download the sequence:
Link to NCBI Protein BLAST